RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 TNFRSF1AP19438 455 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 BCL3P20749 454 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 NPBWR2P48146 333 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 IL18Q14116 193 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 ZNF846Q147U1 533 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 TESK1Q15569 626 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 PCGF3Q3KNV8 242 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 METAP1DQ6UB28 335 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-210ENST00000641115 Q8IYB0 196 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 OSR2Q8N2R0 312 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 MFSD4AQ8N468 514 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 MRPS24Q96EL2 167 aaKnown RBP16.79■□□□□ 0.28
PHGDH-210ENST00000641115 SELENOIQ9C0D9 397 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 FN3KRPQ9HA64 309 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 UBTD1Q9HAC8 227 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 DECR2Q9NUI1 292 aa16.79■□□□□ 0.28
PHGDH-210ENST00000641115 FAM221AA4D161 298 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 CPT2P23786 658 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 GATA4P43694 442 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 PPOXP50336 477 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 RPS27AP62979 156 aaKnown RBP16.78■□□□□ 0.28
PHGDH-210ENST00000641115 CCL8P80075 99 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 TMEM69Q5SWH9 247 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 SP5Q6BEB4 398 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ELP2Q6IA86 826 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 RAB12Q6IQ22 244 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 BAIAP2L2Q6UXY1 529 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 C11orf53Q8IXP5 236 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 BATF2Q8N1L9 274 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ZCCHC24Q8N2G6 241 aaKnown RBP16.78■□□□□ 0.28
PHGDH-210ENST00000641115 SAP30LQ9HAJ7 183 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 RBFOX1Q9NWB1 397 aaKnown RBP16.78■□□□□ 0.28
PHGDH-210ENST00000641115 C1orf123Q9NWV4 160 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 V9GYH0 126 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ROS1P08922 2347 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 RAI1Q7Z5J4 1906 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-210ENST00000641115 CDK2P24941 298 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 MADCAM1Q13477 382 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 WDR82Q6UXN9 313 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ZNF826PQ6ZT77 177 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 MOGAT3Q86VF5 341 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 DTX3Q8N9I9 347 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 OR51T1Q8NGJ9 327 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ERGIC1Q969X5 290 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 LPAR5Q9H1C0 372 aa16.78■□□□□ 0.28
PHGDH-210ENST00000641115 ARFGEF3Q5TH69 2177 aa16.77■□□□□ 0.28
PHGDH-210ENST00000641115 A0A0A6YYH2 397 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 A6NJ64 397 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 ACAA1P09110 424 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-210ENST00000641115 DANCRP0C864 163 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 PGA5P0DJD9 388 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 NR4A2P43354 598 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 PITPNBP48739 271 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 FGF12P61328 243 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 TLE4Q04727 773 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 DTX2Q86UW9 622 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 POC1AQ8NBT0 407 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 Q8NFD4 153 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 OR56B1Q8NGI3 324 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 EMG1Q92979 244 aaKnown RBP16.77■□□□□ 0.27
PHGDH-210ENST00000641115 ZNF488Q96MN9 340 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 VRK1Q99986 396 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-210ENST00000641115 NRIP2Q9BQI9 281 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 NICN1Q9BSH3 213 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 CLEC4MQ9H2X3 399 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-210ENST00000641115 RABL2AQ9UBK7 228 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-210ENST00000641115 RABL2BQ9UNT1 228 aa16.77■□□□□ 0.27
PHGDH-210ENST00000641115 ABCA4P78363 2273 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 AKR7A2O43488 359 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 XRCC3O43542 346 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 NOS1APO75052 506 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-210ENST00000641115 NXPH2O95156 264 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 CHRM2P08172 466 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 SOD3P08294 240 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 PTBP1P26599 531 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHGDH-210ENST00000641115 VEGFCP49767 419 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 RBM11P57052 281 aaKnown RBP16.76■□□□□ 0.27
PHGDH-210ENST00000641115 SPRNQ5BIV9 151 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 BIVMQ86UB2 503 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 IZUMO1Q8IYV9 350 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 LRRC29Q8WV35 223 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 Q96M66 194 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 TM2D1Q9BX74 207 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 GCM1Q9NP62 436 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 PPP1R3CQ9UQK1 317 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 ST3GAL6Q9Y274 331 aa16.76■□□□□ 0.27
PHGDH-210ENST00000641115 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 F8VVB4 439 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 F8VWA3 439 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 PRKACAP17612 351 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 ERVK11-1P61568 191 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 PITPNAQ00169 270 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 PIGYQ3MUY2 71 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 C11orf71Q6IPW1 123 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 FAM58AQ8N1B3 248 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 OR11L1Q8NGX0 322 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 OR10Z1Q8NGY1 313 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 LAMP3Q9UQV4 416 aa16.75■□□□□ 0.27
PHGDH-210ENST00000641115 MRPS7Q9Y2R9 242 aaKnown RBP16.75■□□□□ 0.27
PHGDH-210ENST00000641115 CACNA1DQ01668 2161 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms