RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
PAX6-280ENST00000640872 FER1L5A0AVI2 2057 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 IFITM10A6NMD0 228 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 ZNF729A6NN14 1252 aaPredicted RBP11.96□□□□□ -0.49
PAX6-280ENST00000640872 DIRAS3O95661 229 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 OR5AC1P0C628 307 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 OR5H8P0DN80 308 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 CTSSP25774 331 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 CHATP28329 748 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 RAB2AP61019 212 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 HIST3H3Q16695 136 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 SP6Q3SY56 376 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 C1orf189Q5VU69 101 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 PLXDC2Q6UX71 529 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 LRRC18Q8N456 261 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 LFNGQ8NES3 379 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 AKR7LQ8NHP1 331 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 LMX1AQ8TE12 382 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 PGAM5Q96HS1 289 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 SPSB2Q99619 263 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 V9GYS6 101 aa11.96□□□□□ -0.49
PAX6-280ENST00000640872 ABCA7Q8IZY2 2146 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 ZNF814B7Z6K7 855 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 OR2C1O95371 312 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 TMEM225BP0DP42 221 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 FCGR2AP12318 317 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 NME1P15531 152 aaKnown RBP11.96□□□□□ -0.5
PAX6-280ENST00000640872 FOXL2P58012 376 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 SLC25A53Q5H9E4 307 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 LYZL2Q7Z4W2 148 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 TDHQ8IZJ6 230 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 HSD17B11Q8NBQ5 300 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 OR6X1Q8NH79 312 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 RNF138Q8WVD3 245 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 HAS2Q92819 552 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 MUCL1Q96DR8 90 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 C18orf12Q96KH6 178 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 Q96M66 194 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 CHST5Q9GZS9 411 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 KCNIP3Q9Y2W7 256 aa11.96□□□□□ -0.5
PAX6-280ENST00000640872 MED19A0JLT2 244 aaPredicted RBP11.95□□□□□ -0.5
PAX6-280ENST00000640872 DHRS3O75911 302 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 QDPRP09417 244 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 FAHP16930 419 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 GABRR1P24046 479 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 HAAOP46952 286 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 ZNF133P52736 654 aaPredicted RBP11.95□□□□□ -0.5
PAX6-280ENST00000640872 IL13RA2Q14627 380 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 PLPPR5Q32ZL2 321 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 APCDD1LQ8NCL9 501 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 PLPP5Q8NEB5 264 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 MRGPRX4Q96LA9 322 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 S100A13Q99584 98 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 SMDT1Q9H4I9 107 aa11.95□□□□□ -0.5
PAX6-280ENST00000640872 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 NDUFS6O75380 124 aaKnown RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 YIF1AO95070 293 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 OPN1LWP04000 364 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 NHLH2Q02577 135 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 SOHLH1Q5JUK2 328 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 ZNF574Q6ZN55 896 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 TMEM182Q6ZP80 229 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 SHISA6Q6ZSJ9 500 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 SUMF2Q8NBJ7 301 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 OR52M1Q8NGK5 317 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 SLC22A8Q8TCC7 542 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 THAP3Q8WTV1 239 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 RTN4IP1Q8WWV3 396 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 TOMM40LQ969M1 308 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 PIGTQ969N2 578 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 RARRES2Q99969 163 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 ELL3Q9HB65 397 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
PAX6-280ENST00000640872 ASXL3Q9C0F0 2248 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 TMEM265A0A087WTH1 108 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 A0A0U1RQV5 110 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 CDX1P47902 265 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
PAX6-280ENST00000640872 COL19A1Q14993 1142 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 PYY3Q5JQD4 70 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 OGFOD3Q6PK18 319 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 Q6ZSR3 168 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 FAM213BQ8TBF2 198 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 MR1Q95460 341 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 TREM2Q9NZC2 230 aa11.94□□□□□ -0.5
PAX6-280ENST00000640872 A0A1B0GV50 99 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 RAMP1O60894 148 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 SLC34A2O95436 690 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 DUSP1P28562 367 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 CSNK1A1P48729 337 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 HIKESHIQ53FT3 197 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms