RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 WNT5AP41221 380 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 PRDX4Q13162 271 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 MRPL49Q13405 166 aaKnown RBP10.55□□□□□ -0.72
PAX6-261ENST00000639943 NSUN5P2Q63ZY6 315 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 RPUSD3Q6P087 351 aaKnown RBP10.55□□□□□ -0.72
PAX6-261ENST00000639943 OR52B4Q8NGK2 314 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 OR13C8Q8NGS7 320 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 WBP1Q96G27 269 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 DLL4Q9NR61 685 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 PLEKHJ1Q9NW61 149 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 MGAT4CQ9UBM8 478 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 GPR160Q9UJ42 338 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 J3QW42 95 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 PMP2P02689 132 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 TMEM11P17152 192 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 FOXC1Q12948 553 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 CEACAM21Q3KPI0 293 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 ATPAF1Q5TC12 328 aaPredicted RBP10.55□□□□□ -0.72
PAX6-261ENST00000639943 BRICD5Q6PL45 260 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 HOGA1Q86XE5 327 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 ZDHHC23Q8IYP9 409 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 ZDHHC22Q8N966 263 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 OR51F2Q8NH61 342 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 FBXW5Q969U6 566 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 CHST6Q9GZX3 395 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
PAX6-261ENST00000639943 ZFHX4Q86UP3 3567 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 PQLC2LA1A4F0 135 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 CD300LBA8K4G0 201 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 RGS13O14921 159 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 NDUFA2O43678 99 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 CRYABP02511 175 aaKnown RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 ZNF14P17017 642 aaPredicted RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 GABRA6Q16445 453 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 ZNF585AQ6P3V2 769 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 INO80CQ6PI98 192 aaPredicted RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 TMED4Q7Z7H5 227 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 OSR2Q8N2R0 312 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 RBMXL3Q8N7X1 1067 aaKnown RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 ZNF431Q8TF32 576 aaPredicted RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 BOD1Q96IK1 185 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 TMEM246Q9BRR3 403 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 PLSCR3Q9NRY6 295 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 LYZL6O75951 148 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 OR4E1P0C645 316 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 AMY2BP19961 511 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 TAS2R46P59540 309 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 MICBQ29980 383 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 ARRDC1Q8N5I2 433 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 C1orf162Q8NEQ5 155 aaPredicted RBP10.54□□□□□ -0.72
PAX6-261ENST00000639943 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 ST6GALNAC5Q9BVH7 336 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 PLSCR4Q9NRQ2 329 aa10.54□□□□□ -0.72
PAX6-261ENST00000639943 SVILO95425 2214 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 ANKRD30BLA7E2S9 258 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 MKRN2OSH3BPM6 223 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 GIPP09681 153 aaPredicted RBP10.53□□□□□ -0.72
PAX6-261ENST00000639943 COX5AP20674 150 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 P2RX3P56373 397 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 TAF9Q16594 264 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 VWA1Q6PCB0 445 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 C6orf201Q7Z4U5 140 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 STX12Q86Y82 276 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 SAXO1Q8IYX7 474 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 ZNF611Q8N823 705 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 OR5A2Q8NGI9 324 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 SLA2Q9H6Q3 261 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 CDH20Q9HBT6 801 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 VSIG4Q9Y279 399 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 FIGNL2A6NMB9 653 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 HOXC12P31275 282 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 SNU13P55769 128 aaKnown RBP10.53□□□□□ -0.72
PAX6-261ENST00000639943 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 CALHM1Q8IU99 346 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 ASCC1Q8N9N2 400 aaKnown RBP10.53□□□□□ -0.72
PAX6-261ENST00000639943 GALNT11Q8NCW6 608 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
PAX6-261ENST00000639943 GPR137Q96N19 417 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 MGAT4AQ9UM21 535 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 MPC1Q9Y5U8 109 aa10.53□□□□□ -0.72
PAX6-261ENST00000639943 INTS1Q8N201 2190 aaKnown RBP10.52□□□□□ -0.72
PAX6-261ENST00000639943 MBD3L4A6NDZ8 208 aaPredicted RBP10.52□□□□□ -0.73
PAX6-261ENST00000639943 MBD3L3A6NE82 208 aaPredicted RBP10.52□□□□□ -0.73
PAX6-261ENST00000639943 MBD3L5A6NJ08 208 aaPredicted RBP10.52□□□□□ -0.73
PAX6-261ENST00000639943 OR2A4O95047 310 aa10.52□□□□□ -0.73
PAX6-261ENST00000639943 SFTPBP07988 381 aa10.52□□□□□ -0.73
PAX6-261ENST00000639943 DNASE1P24855 282 aa10.52□□□□□ -0.73
PAX6-261ENST00000639943 CHATP28329 748 aa10.52□□□□□ -0.73
PAX6-261ENST00000639943 OR3A3P47888 321 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms