RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZNF92Q03936 586 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 KCTD9Q7L273 389 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 C6orf201Q7Z4U5 140 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 OR5AP2Q8NGF4 316 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SCARB1Q8WTV0 552 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PPP1R1CQ8WVI7 109 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 BORCS8Q96FH0 119 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 A0A0D9SG52 128 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SPRY1O43609 319 aaPredicted RBP13.06□□□□□ -0.32
TRIM3-215ENST00000639856 ANGPTL7O43827 346 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 HTR3BO95264 441 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SERPINA5P05154 406 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 AP2S1P53680 142 aaPredicted RBP13.06□□□□□ -0.32
TRIM3-215ENST00000639856 RSU1Q15404 277 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 OR8B8Q15620 311 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 AADACL3Q5VUY0 350 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 ALKAL2Q6UX46 152 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 RFPL4BQ6ZWI9 263 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 OR13G1Q8NGZ3 307 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 TAAR6Q96RI8 345 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 SCNM1Q9BWG6 230 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 EHFQ9NZC4 300 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 OSGIN2Q9Y236 505 aa13.06□□□□□ -0.32
TRIM3-215ENST00000639856 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 RPL36A-HNRNPH2H7BZ11 118 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 K7EM74 188 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 SDCBPO00560 298 aaPredicted RBP13.05□□□□□ -0.32
TRIM3-215ENST00000639856 XRCC2O43543 280 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 GFRA3O60609 400 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 LRRC37A5PQ49AS3 106 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 OVCH2Q7RTZ1 564 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 CPEB3Q8NE35 698 aaKnown RBP13.05□□□□□ -0.32
TRIM3-215ENST00000639856 MAFIPQ8WZ33 124 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 PPA2Q9H2U2 334 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 TNFSF18Q9UNG2 199 aa13.05□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF503-AS2A6NEH8 195 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 PLATP00750 562 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 EDN3P14138 238 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 ATP1B3P54709 279 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF345Q14585 488 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 STK11Q15831 433 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 CHRFAM7AQ494W8 412 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF660Q6AZW8 331 aaPredicted RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 SNIP1Q8TAD8 396 aaKnown RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 EMG1Q92979 244 aaKnown RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF701Q9NV72 531 aaPredicted RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 HSF4Q9ULV5 492 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 OR2F2O95006 317 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 FUT6P51993 359 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 OR2F1Q13607 317 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF169Q14929 603 aaPredicted RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 NKAPLQ5M9Q1 402 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 RPUSD3Q6P087 351 aaKnown RBP13.04□□□□□ -0.32
TRIM3-215ENST00000639856 COLCA1Q6ZS62 124 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 KCNRGQ8N5I3 272 aa13.04□□□□□ -0.32
TRIM3-215ENST00000639856 SPTBN4Q9H254 2564 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 I3L521 148 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SFT2D2O95562 160 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 HLA-HP01893 362 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 NMBP08949 121 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 BAMBIQ13145 260 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 TAF9Q16594 264 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 AANATQ16613 207 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 NSUN5P2Q63ZY6 315 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 TECTBQ96PL2 329 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SLC7A11Q9UPY5 501 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 MAP1BP46821 2468 aaKnown RBP13.03□□□□□ -0.32
TRIM3-215ENST00000639856 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 A0A0B4J2A0 478 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SPDEFO95238 335 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 PI3P19957 117 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SURF2Q15527 256 aaPredicted RBP13.03□□□□□ -0.32
TRIM3-215ENST00000639856 IGFL3Q6UXB1 125 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 CLEC18BQ6UXF7 455 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms