RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 C10orf67Q8IYJ2 551 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 SVOPLQ8N434 492 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 POM121L2Q96KW2 1035 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 SCGB3A2Q96PL1 93 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 PEBP4Q96S96 227 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 MCHR1Q99705 422 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 WACQ9BTA9 647 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 TIGARQ9NQ88 270 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 ASF1BQ9NVP2 202 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 USH1CQ9Y6N9 552 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 HIVEP3Q5T1R4 2406 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 ITPR2Q14571 2701 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 TNRC6AQ8NDV7 1962 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 MEIOCA2RUB1 952 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 C2orf74A8MZ97 194 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 PRSS44E7EML9 344 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 NPIPB9F8W1W9 429 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 GATCO43716 136 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 RAB36O95755 333 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 HLA-AP01891 365 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 LIMS3P0CW19 117 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 LIMS4P0CW20 117 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 CBR1P16152 277 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 HIST1H1CP16403 213 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 HNRNPA3P51991 378 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 MAXP61244 160 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 RANP62826 216 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 SLC25A11Q02978 314 aaKnown RBP5.95□□□□□ -1.46
NECAP1-220ENST00000639841 ACSM3Q53FZ2 586 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 PDZD11Q5EBL8 140 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 MED27Q6P2C8 311 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 XKRXQ6PP77 449 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 SPNS3Q6ZMD2 512 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 TMEM135Q86UB9 458 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 CALHM1Q8IU99 346 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 OR2T11Q8NH01 316 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 ADAMTS16Q8TE57 1224 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 TMEM80Q96HE8 168 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 GPR22Q99680 433 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 PITPNM3Q9BZ71 974 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 ACOT9Q9Y305 439 aa5.95□□□□□ -1.46
NECAP1-220ENST00000639841 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 FUOMA2VDF0 154 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 MSGN1A6NI15 193 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 SMKR1H3BMG3 65 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 H7C0C1 242 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 NME4O00746 187 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 UGT1A9O60656 530 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 AQP8O94778 261 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 TBPP20226 339 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 RAB4AP20338 218 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 ME2P23368 584 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 MPGP29372 298 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 DCDP81605 110 aaKnown RBP5.94□□□□□ -1.46
NECAP1-220ENST00000639841 SSBP2P81877 361 aaPredicted RBP5.94□□□□□ -1.46
NECAP1-220ENST00000639841 ZNF726P1Q15940 193 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 MRPL52Q86TS9 123 aaKnown RBP5.94□□□□□ -1.46
NECAP1-220ENST00000639841 ZNF491Q8N8L2 437 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 RFESDQ8TAC1 157 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 MCOLN3Q8TDD5 553 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 WFIKKN1Q96NZ8 548 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 HES7Q9BYE0 225 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 CHIAQ9BZP6 476 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 SLC2A6Q9UGQ3 507 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 ZNF256Q9Y2P7 627 aaPredicted RBP5.94□□□□□ -1.46
NECAP1-220ENST00000639841 C2CD3Q4AC94 2353 aa5.94□□□□□ -1.46
NECAP1-220ENST00000639841 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
NECAP1-220ENST00000639841 CACNA1DQ01668 2161 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 RNF212BA8MTL3 300 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 ACOX3O15254 700 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 TBX6O95947 436 aaPredicted RBP5.93□□□□□ -1.46
NECAP1-220ENST00000639841 GNAO1P09471 354 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 TAS2R31P59538 309 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 MYL5Q02045 173 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 TGFBR3Q03167 851 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 FOXF2Q12947 444 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 GAGE5Q13069 117 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 GAGE6Q13070 117 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 IL18R1Q13478 541 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 FAM219BQ5XKK7 198 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 SAXO2Q658L1 398 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 EPGNQ6UW88 154 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 NT5DC3Q86UY8 548 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 RIBC1Q8N443 379 aaPredicted RBP5.93□□□□□ -1.46
NECAP1-220ENST00000639841 SYNPRQ8TBG9 265 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 EEF1AKMT3Q96AZ1 226 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 IMP4Q96G21 291 aaKnown RBP5.93□□□□□ -1.46
NECAP1-220ENST00000639841 MS4A14Q96JA4 679 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 VAT1Q99536 393 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 EBNA1BP2Q99848 306 aaKnown RBP5.93□□□□□ -1.46
NECAP1-220ENST00000639841 LIME1Q9H400 295 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 ACOT13Q9NPJ3 140 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 FGFR1OP2Q9NVK5 253 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 GIN1Q9NXP7 522 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 MLXQ9UH92 298 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 KLF12Q9Y4X4 402 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 TRAV17A0A0B4J275 112 aa5.93□□□□□ -1.46
NECAP1-220ENST00000639841 ZNF705EA8MWA4 302 aaPredicted RBP5.93□□□□□ -1.46
NECAP1-220ENST00000639841 CCRL2O00421 344 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms