RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KIAA0141Q14154 515 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-216ENST00000639300 C3AR1Q16581 482 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 ASB13Q8WXK3 278 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 DOPEY2Q9Y3R5 2298 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 FIGNL2A6NMB9 653 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 GPR31O00270 319 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 DXOO77932 396 aaKnown RBP12.74□□□□□ -0.37
SCARB2-216ENST00000639300 GABRA1P14867 456 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 RBPJQ06330 500 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 SSPNQ14714 243 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 CLEC9AQ6UXN8 241 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 OR2M3Q8NG83 312 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 ABHD3Q8WU67 409 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 A0A1W2PP11 408 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 MPPED2Q15777 294 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 GGNBP1Q5YKI7 109 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 AKR1E2Q96JD6 320 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 CXorf58Q96LI9 332 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 RIMS4Q9H426 269 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-216ENST00000639300 RAB18Q9NP72 206 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 HMSDA8MTL9 139 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 ADAM10O14672 748 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 TTRP02766 147 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 PMP22Q01453 160 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 SSX2Q16385 188 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 SIGIRRQ6IA17 410 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 PROCRQ9UNN8 238 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
SCARB2-216ENST00000639300 AQP7P3A6NL99 342 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 TSPAN2O60636 221 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 OR2C1O95371 312 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 GPR12P47775 334 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-216ENST00000639300 SPEM2Q0P670 501 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 GGTLC2Q14390 218 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 TMPRSS7Q7RTY8 843 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 SLC35G3Q8N808 338 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 CDX2Q99626 313 aaPredicted RBP12.73□□□□□ -0.37
SCARB2-216ENST00000639300 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
SCARB2-216ENST00000639300 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 IGF2P01344 180 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 LSM6P62312 80 aaKnown RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 PDZD11Q5EBL8 140 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 CLEC18BQ6UXF7 455 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 DECR2Q9NUI1 292 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 M0R1B8 84 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 UPK3AO75631 287 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 LYZL6O75951 148 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF816Q0VGE8 651 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 RPUSD4Q96CM3 377 aaKnown RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 INTS1Q8N201 2190 aaKnown RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 ACKR3P25106 362 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 MEOX1P50221 254 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 MICBQ29980 383 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 RPL7L1Q6DKI1 246 aaKnown RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 OR10P1Q8NGE3 313 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 SCARF2Q96GP6 870 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 SDHCQ99643 169 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 PECRQ9BY49 303 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 SAMD10Q9BYL1 202 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 MED9Q9NWA0 146 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 PSENENQ9NZ42 101 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 FZR1Q9UM11 496 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 PMS2P1A4D2B8 440 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 MT-ND4LP03901 98 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-216ENST00000639300 BPIFCQ8NFQ6 507 aa12.72□□□□□ -0.37
SCARB2-216ENST00000639300 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 A0A1W2PPC1 479 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 TRIM64BA6NI03 449 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 ZNHIT1O43257 154 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 RPS4Y1P22090 263 aaKnown RBP12.71□□□□□ -0.37
SCARB2-216ENST00000639300 MRPL41Q8IXM3 137 aaKnown RBP12.71□□□□□ -0.37
SCARB2-216ENST00000639300 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 CLEC18AA5D8T8 446 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 GEMIN2O14893 280 aaKnown RBP12.71□□□□□ -0.37
SCARB2-216ENST00000639300 LMX1BO60663 402 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 OR8U8P0C7N1 319 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 SELEP16581 610 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 ZXDAP98168 799 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF766Q5HY98 468 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 SLC38A6Q8IZM9 456 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 CLEC18CQ8NCF0 446 aa12.71□□□□□ -0.37
SCARB2-216ENST00000639300 ADAM19Q9H013 955 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms