RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 STARD4Q96DR4 205 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 NMNAT3Q96T66 252 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 GFI1Q99684 422 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 MAP1LC3BQ9GZQ8 125 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CST9LQ9H4G1 147 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 HSPB7Q9UBY9 170 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 APOBEC3BQ9UH17 382 aaKnown RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 WDR87Q6ZQQ6 2873 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TRBV6-7A0A0A0MS04 114 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CEBPZOSA8MTT3 80 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SLC17A2O00624 439 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 VAMP5O95183 116 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SFT2D2O95562 160 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TTRP02766 147 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TDGF1P13385 188 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TNFSF4P23510 183 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SERPINA4P29622 427 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CLDN2P57739 230 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 DCAF7P61962 342 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 IL24Q13007 206 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CCSMST1Q4G0I0 132 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 LRRC73Q5JTD7 316 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 VWA1Q6PCB0 445 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SMIM7Q9BQ49 75 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SH3BGRL3Q9H299 93 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SLC35D1Q9NTN3 355 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 AHCTF1Q8WYP5 2266 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 ZNF840PA6NDX5 716 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 E5RGE8 158 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 J3QRE1 110 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 K7EP13 123 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TRAF3IP2O43734 574 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 H2BFMP0C1H6 154 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 HMGA1P17096 107 aaKnown RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CORO1AP31146 461 aaKnown RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 OR1D2P34982 312 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 PRLHRP49683 370 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 NANOS3P60323 173 aaKnown RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 RAB35Q15286 201 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 LPAL2Q16609 132 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 ABCA11PQ4W5N1 156 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TPTE2P1Q5T6R2 138 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 UNQ9370/PRO34162Q6UXP9 181 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 SLCO4C1Q6ZQN7 724 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 ABHD12BQ7Z5M8 362 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-213ENST00000638883 ADGRE4PQ86SQ3 457 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TIMP4Q99727 224 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 HSPB9Q9BQS6 159 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 PCGF1Q9BSM1 259 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 ST6GALNAC5Q9BVH7 336 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 C20orf141Q9NUB4 165 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 LHX3Q9UBR4 397 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 KCNK6Q9Y257 313 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 NSG2Q9Y328 171 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 WIPI2Q9Y4P8 454 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
NECAP1-213ENST00000638883 A0A0U1RQK1 487 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 C1QTNF3-AMACRE9PGA6 284 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 GNG7O60262 68 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 MT-CO2P00403 227 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 PPBPP02775 128 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 CTSBP07858 339 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 MELTFP08582 738 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 ZGLP1P0C6A0 271 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 SCAND1P57086 179 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 ZNF266Q14584 549 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 Q6ZVH6 145 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 NUP43Q8NFH3 380 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 ANKRD9Q96BM1 317 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 MS4A6EQ96DS6 147 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 NUDT16L1Q9BRJ7 211 aaKnown RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 KIAA1456Q9P272 454 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 SRPK3Q9UPE1 567 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 CACNA1BQ00975 2339 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 FAM186AA6NE01 2351 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 NPIPA5A0A0B4J1W7 369 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 TMEM212A6NML5 194 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 OR7C2O60412 319 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 NDUFB2O95178 105 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 IFNA1P01562 189 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 STATHP02808 62 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 GLB1P16278 677 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 CSNK2A2P19784 350 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 CSNK2A1P68400 391 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-213ENST00000638883 SAMD13Q5VXD3 122 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 FBXW12Q6X9E4 464 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 NIT1Q86X76 327 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 SIGLECL1Q8N7X8 197 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 STPG4Q8N801 248 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 CSNK2A3Q8NEV1 391 aa6.3□□□□□ -1.4
NECAP1-213ENST00000638883 OR4D6Q8NGJ1 314 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms