RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CHST4Q8NCG5 386 aa10□□□□□ -0.81
CLN6-223ENST00000637823 OR10AD1Q8NGE0 317 aa10□□□□□ -0.81
CLN6-223ENST00000637823 SLAMF9Q96A28 289 aa10□□□□□ -0.81
CLN6-223ENST00000637823 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
CLN6-223ENST00000637823 Q96M66 194 aa10□□□□□ -0.81
CLN6-223ENST00000637823 DIRC2Q96SL1 478 aa10□□□□□ -0.81
CLN6-223ENST00000637823 GAL3ST1Q99999 423 aa10□□□□□ -0.81
CLN6-223ENST00000637823 TMEM204Q9BSN7 226 aa10□□□□□ -0.81
CLN6-223ENST00000637823 TLNRD1Q9H1K6 362 aa10□□□□□ -0.81
CLN6-223ENST00000637823 AUNIPQ9H7T9 357 aa10□□□□□ -0.81
CLN6-223ENST00000637823 MTCH1Q9NZJ7 389 aa10□□□□□ -0.81
CLN6-223ENST00000637823 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
CLN6-223ENST00000637823 ROS1P08922 2347 aa10□□□□□ -0.81
CLN6-223ENST00000637823 A0A0A6YYD4 124 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A10PA6NDY2 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A18PA6NE21 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A16PA6NEW6 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A20PA6NIJ5 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ZSCAN5BA6NJL1 495 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A8PA6NJQ4 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A7PA6NKC0 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A22PA8MWA6 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A12PA8MX19 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A5PA8MXJ8 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A23PA8MXZ1 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 SULT1C2O00338 296 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 CDIPTO14735 213 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 SOCS1O15524 211 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 SYNGR1O43759 233 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 NOS1APO75052 506 aaPredicted RBP9.99□□□□□ -0.81
CLN6-223ENST00000637823 PTBP3O95758 552 aaKnown RBP9.99□□□□□ -0.81
CLN6-223ENST00000637823 PLAUP00749 431 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 SFTPBP07988 381 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ADH4P08319 380 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 GSTP1P09211 210 aaKnown RBP9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A15PP0C7V4 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A13PP0C7W8 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A14PP0C7W9 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 FAM90A24PP0C7X0 464 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 IGFBP2P18065 325 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 TNFSF4P23510 183 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 CPT2P23786 658 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 PRSS3P35030 304 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 NPBWR2P48146 333 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 SRP9P49458 86 aaKnown RBP9.99□□□□□ -0.81
CLN6-223ENST00000637823 ZNF81P51508 661 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 DEFA1P59665 94 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 DEFA3P59666 94 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ZNF154Q13106 437 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 MAB21L1Q13394 359 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ARL6IP1Q15041 203 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 MOGAT2Q3SYC2 334 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 TRIQKQ629K1 86 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 DNM1P46Q6ZS02 220 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 C11orf53Q8IXP5 236 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 Q8IYB0 196 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 C19orf18Q8NEA5 215 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 LILRB1Q8NHL6 650 aaPredicted RBP9.99□□□□□ -0.81
CLN6-223ENST00000637823 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ELMOD3Q96FG2 381 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 DHRS9Q9BPW9 319 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 NICN1Q9BSH3 213 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 ARFGEF3Q5TH69 2177 aa9.99□□□□□ -0.81
CLN6-223ENST00000637823 DYSFO75923 2080 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 ADGRG4Q8IZF6 3080 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 A0A1W2PQ09 198 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 FOXI3A8MTJ6 420 aaPredicted RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 B9A039 149 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 H3BUI4 141 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 MELTFP08582 738 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 BLVRBP30043 206 aaPredicted RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 INPP1P49441 399 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 TMEM50BP56557 158 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 RBM11P57052 281 aaKnown RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 FGF12P61328 243 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 DGCR2P98153 550 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 DAZAP2Q15038 168 aaPredicted RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 EFNB3Q15768 340 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 ZNF260Q3ZCT1 412 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 Q6ZTK2 550 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 FAM58AQ8N1B3 248 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 FBXL14Q8N1E6 418 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 OR52I2Q8NH67 350 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 SETD6Q8TBK2 473 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 GTF3AQ92664 365 aaKnown RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 NEUROG1Q92886 237 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 YIPF5Q969M3 257 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 RAB3CQ96E17 227 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 SCPEP1Q9HB40 452 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
CLN6-223ENST00000637823 IL19Q9UHD0 177 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 HSF4Q9ULV5 492 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 ST3GAL6Q9Y274 331 aa9.98□□□□□ -0.81
CLN6-223ENST00000637823 CACNA1DQ01668 2161 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 ABCA4P78363 2273 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 F8VVB4 439 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 F8VWA3 439 aa9.97□□□□□ -0.81
CLN6-223ENST00000637823 C19orf84I3L1E1 186 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms