RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CAB39Q9Y376 341 aaPredicted RBP11.36□□□□□ -0.59
PNKP-228ENST00000637325 TRBV23-1A0A0A0MS06 115 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 M0R1W7 72 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 INMTO95050 263 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 FADS2O95864 444 aaKnown RBP11.35□□□□□ -0.59
PNKP-228ENST00000637325 MELTFP08582 738 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 OCM2P0CE71 109 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 OCMP0CE72 109 aaPredicted RBP11.35□□□□□ -0.59
PNKP-228ENST00000637325 GABRB1P18505 474 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 MPZP25189 248 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 ATP1B3P54709 279 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 ZNF91Q05481 1191 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 IL24Q13007 206 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 ZSCAN26Q16670 478 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 LHFPL3Q86UP9 236 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 CD177Q8N6Q3 437 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 RHOXF1Q8NHV9 184 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 TBC1D15Q8TC07 691 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 PP6455Q8WZ26 134 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 NRIP2Q9BQI9 281 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 AMBNQ9NP70 447 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 FRRS1LQ9P0K9 344 aa11.35□□□□□ -0.59
PNKP-228ENST00000637325 RPL36Q9Y3U8 105 aaKnown RBP11.35□□□□□ -0.59
PNKP-228ENST00000637325 A0A0U1RQK1 487 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 A0A1W2PPH5 198 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 H0YAE9 185 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 CYB5AP00167 134 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 PRB3Q04118 309 aaPredicted RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 RAB40BQ12829 278 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 GALEQ14376 348 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 NCR3LG1Q68D85 454 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 FDX2Q6P4F2 183 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 TMEM86BQ8N661 226 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 Q8N7P7 452 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 ZNF676Q8N7Q3 588 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 SLAMF9Q96A28 289 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 FGGYQ96C11 551 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 PELI1Q96FA3 418 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 CEP19Q96LK0 163 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 METTL8Q9H825 291 aaKnown RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 INPP5EQ9NRR6 644 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
PNKP-228ENST00000637325 HHLA2Q9UM44 414 aa11.34□□□□□ -0.59
PNKP-228ENST00000637325 RNASEK-C17orf49H0YIS7 233 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 NPFFO15130 113 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 KNG1P01042 644 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 ISG15P05161 165 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 ATF1P18846 271 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 PRKACBP22694 351 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 RBP2P50120 134 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 CCR9P51686 369 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 DLX1P56177 255 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 MTCP1P56278 107 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 NANOS3P60323 173 aaKnown RBP11.33□□□□□ -0.6
PNKP-228ENST00000637325 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
PNKP-228ENST00000637325 KLRD1Q13241 179 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
PNKP-228ENST00000637325 KLHL22Q53GT1 634 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 SLC25A26Q70HW3 274 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 EGFL6Q8IUX8 553 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 MKXQ8IYA7 352 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 OR13C3Q8NGS6 347 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
PNKP-228ENST00000637325 ADAT3Q96EY9 351 aaPredicted RBP11.33□□□□□ -0.6
PNKP-228ENST00000637325 RDH12Q96NR8 316 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 MYRFQ9Y2G1 1151 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
PNKP-228ENST00000637325 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 A0A1W2PR64 198 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 PAHP00439 452 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 TK1P04183 234 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 CHRM2P08172 466 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 FBP1P09467 338 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 AZGP1P25311 298 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 POU3F4P49335 361 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 GBX2P52951 348 aaPredicted RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 ERVK11-1P61568 191 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 LRRC36Q1X8D7 754 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 UTS2BQ765I0 119 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 ASCC1Q8N9N2 400 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 DNAAF1Q8NEP3 725 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 OR4M1Q8NGD0 313 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms