RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 HAAOP46952 286 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 CEBPDP49716 269 aaPredicted RBP13.2□□□□□ -0.3
CLN3-255ENST00000637100 MNAT1P51948 309 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 BLCAPP62952 87 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 CLVS2Q5SYC1 327 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 PLCXD3Q63HM9 321 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 OR4M1Q8NGD0 313 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 OR13D1Q8NGV5 346 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 SGCDQ92629 289 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
CLN3-255ENST00000637100 MROQ9BYG7 248 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 PKIBQ9C010 78 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 SLC25A19Q9HC21 320 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 TAS2R1Q9NYW7 299 aa13.2□□□□□ -0.3
CLN3-255ENST00000637100 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 GSC2O15499 205 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 IGHV1-8P0DP01 117 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 IL24Q13007 206 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 MINOS1Q5TGZ0 78 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 ZNF782Q6ZMW2 699 aaPredicted RBP13.19□□□□□ -0.3
CLN3-255ENST00000637100 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 ASB17Q8WXJ9 295 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 CHID1Q9BWS9 393 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 ARL2BPQ9Y2Y0 163 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 MINOS1-NBL1R4GNA1 71 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 DSCAML1Q8TD84 2053 aa13.19□□□□□ -0.3
CLN3-255ENST00000637100 K7EIL1 84 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 NXPH2O95156 264 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 CST1P01037 141 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
CLN3-255ENST00000637100 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
CLN3-255ENST00000637100 SSX2Q16385 188 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 VAX1Q5SQQ9 334 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 COPS3Q9UNS2 423 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 TMEM14AQ9Y6G1 99 aa13.18□□□□□ -0.3
CLN3-255ENST00000637100 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 DCTN3O75935 186 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 ARG1P05089 322 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 CHRM2P08172 466 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 CCL1P22362 96 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
CLN3-255ENST00000637100 EFNB1P98172 346 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 APOFQ13790 326 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
CLN3-255ENST00000637100 ASB9Q96DX5 294 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 FAM107BQ9H098 131 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
CLN3-255ENST00000637100 B2RBV5 119 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 PSMD9O00233 223 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 ALDOBP05062 364 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 ANXA8P13928 327 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 IGLL1P15814 213 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 HOXB6P17509 224 aaKnown RBP13.16□□□□□ -0.3
CLN3-255ENST00000637100 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
CLN3-255ENST00000637100 COL10A1Q03692 680 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 EGFEM1PQ0D2K5 195 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 SLC22A13Q9Y226 551 aa13.16□□□□□ -0.3
CLN3-255ENST00000637100 F8VVB4 439 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 F8VWA3 439 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
CLN3-255ENST00000637100 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 C16orf82Q7Z2V1 217 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 SNX22Q96L94 193 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 ZNF714Q96N38 554 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 MNTQ99583 582 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 LINC00312Q9Y6C7 94 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 R4GMQ9 66 aa13.15□□□□□ -0.3
CLN3-255ENST00000637100 TMEM82A0PJX8 343 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 AQP12BA6NM10 295 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 T-ENOLP0DO92 83 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
CLN3-255ENST00000637100 JUNBP17275 347 aaPredicted RBP13.14□□□□□ -0.31
CLN3-255ENST00000637100 CD33P20138 364 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 OR12D2P58182 307 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 RPS7P62081 194 aaKnown RBP13.14□□□□□ -0.31
CLN3-255ENST00000637100 ACTA2P62736 377 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ACTG2P63267 376 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ACTC1P68032 377 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ACTA1P68133 377 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 ANGPTL5Q86XS5 388 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 AQP12AQ8IXF9 295 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 HS3ST5Q8IZT8 346 aa13.14□□□□□ -0.31
CLN3-255ENST00000637100 CANT1Q8WVQ1 401 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms