RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 RPS10P5Q9NQ39 176 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 GPR27Q9NS67 375 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ASH2LQ9UBL3 628 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF391Q9UJN7 358 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 NXT1Q9UKK6 140 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PADI1Q9ULC6 663 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 OTOGLQ3ZCN5 2332 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 LOC102725191A0A1B0GVB3 256 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CEACAM18A8MTB9 384 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MS4A18H0YCH9 400 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 WRBO00258 174 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PRKNO60260 465 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 GPR137BO60478 399 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DIRAS3O95661 229 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MT-ND4LP03901 98 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SFTA3P0C7M3 94 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 FCGR2AP12318 317 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 LYL1P12980 280 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PRF1P14222 555 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SPINK2P20155 84 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SERPINA2P20848 420 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DUSP1P28562 367 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 TAGLN2P37802 199 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PTGFRP43088 359 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF266Q14584 549 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 KCNMB1Q16558 191 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MS4A18Q3C1V0 323 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 KRTCAP3Q53RY4 240 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ASPHD2Q6ICH7 369 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM211Q6ICI0 200 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF441Q8N8Z8 693 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 STT3BQ8TCJ2 826 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ARHGAP5-AS1Q96IT6 56 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 TECTBQ96PL2 329 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CMSS1Q9BQ75 279 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 TGIF2Q9GZN2 237 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SMDT1Q9H4I9 107 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 BANF2Q9H503 90 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DKKL1Q9UK85 242 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ANAPC10Q9UM13 185 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 IGHV1OR21-1A0A087WYE8 117 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 A0A0U1RQV5 110 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 FAM230AA0A1W2PPH8 454 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DHRS3O75911 302 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CTSBP07858 339 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 QDPRP09417 244 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MYF5P13349 255 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 GLB1P16278 677 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DTYMKP23919 212 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MEOX2P50222 304 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PCBD1P61457 104 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DCDP81605 110 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 FAM3AP98173 230 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MYBPHQ13203 477 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SRSF5Q13243 272 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 UNC119Q13432 240 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 RAB32Q13637 225 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 COTL1Q14019 142 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 FAM69BQ5VUD6 431 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 Q6ZRG5 221 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 GVINP1Q7Z2Y8 2422 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 LDLRAD3Q86YD5 345 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 POC1AQ8NBT0 407 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 OR8B12Q8NGG6 310 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 NTNG2Q96CW9 530 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 BORCS8Q96FH0 119 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 KIRREL1Q96J84 757 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ARHGEF17Q96PE2 2063 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SPSB2Q99619 263 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 NUDT22Q9BRQ3 303 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CRB3Q9BUF7 120 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 RIMS4Q9H426 269 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 BARX1Q9HBU1 254 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CBY1Q9Y3M2 126 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SMG1Q96Q15 3661 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 VSTM5A8MXK1 200 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 C9J4A7 227 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ST8SIA3O43173 380 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 HBE1P02100 147 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SEC11BP0C7V7 166 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CCL1P22362 96 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PAX6P26367 422 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 EPHA8P29322 1005 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PPT1P50897 306 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 OR1D5P58170 312 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MALLQ13021 153 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 MFAP5Q13361 173 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 IL13RA2Q14627 380 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 KISS1Q15726 138 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 GUCA2BQ16661 112 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 HFEQ30201 348 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 RNF212Q495C1 297 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 NKAIN1Q4KMZ8 207 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SLC25A53Q5H9E4 307 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SLC25A24Q6NUK1 477 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ATRAIDQ6UW56 229 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DHRS13Q6UX07 377 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 LHFPL2Q6ZUX7 228 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ANKRD37Q7Z713 158 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms