RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 DIRAS3O95661 229 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 PTBP3O95758 552 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 ALDH3B1P43353 468 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 TLE3Q04726 772 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 EIF3IQ13347 325 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 GAMTQ14353 236 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 DOK3Q7L591 496 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 ZNF721Q8TF20 911 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 GPR61Q9BZJ8 451 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 PISDQ9UG56 409 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 TCFL5Q9UL49 500 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 MMACHCQ9Y4U1 282 aa13.66□□□□□ -0.22
CACNA1A-235ENST00000637004 A0A087X0M5 115 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 A0A1B0GX30 115 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 DDAH2O95865 285 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 CXCL1P09341 107 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 PIGPP57054 158 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 KHDC3LQ587J8 217 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 Q6ZSR6 202 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 SSC4DQ8WTU2 575 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 GABRG3Q99928 467 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 KIAA1456Q9P272 454 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 ADAM10O14672 748 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 CCL1P22362 96 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 DUSP1P28562 367 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 AKT2P31751 481 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 ZNF121P58317 390 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 DLK1P80370 383 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 ZNF266Q14584 549 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 SSX2Q16385 188 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 M1APQ8TC57 530 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 SUCNR1Q9BXA5 334 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 CHST11Q9NPF2 352 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 LANCL2Q9NS86 450 aa13.65□□□□□ -0.22
CACNA1A-235ENST00000637004 MED19A0JLT2 244 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF726A6NNF4 738 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 HSD17B6O14756 317 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 SOD3P08294 240 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF17P17021 662 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 NHLH2Q02577 135 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 KISS1Q15726 138 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 FBXW12Q6X9E4 464 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 LRTM2Q8N967 370 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 TVP23CQ96ET8 276 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 SOX7Q9BT81 388 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 TCEAL2Q9H3H9 227 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 URGCP-MRPS24S4R325 110 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 DHRS7CA6NNS2 312 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF724A8MTY0 619 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 CYB5BO43169 146 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 HOXB2P14652 356 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 BIDP55957 195 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 TMEM187Q14656 261 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 GNMTQ14749 295 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 SLC22A25Q6T423 547 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF429Q86V71 674 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 SSX3Q99909 188 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 TM2D1Q9BX74 207 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 FAM86C1Q9NVL1 165 aa13.64□□□□□ -0.23
CACNA1A-235ENST00000637004 IGKV1-9A0A0C4DH69 117 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 TGOLN2O43493 480 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 OR5H8P0DN80 308 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 RND3P61587 244 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 THEM4Q5T1C6 240 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 OR2T2Q6IF00 324 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 OR5D18Q8NGL1 313 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 JSRP1Q96MG2 331 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 WNT5BQ9H1J7 359 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 ANXA10Q9UJ72 324 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 LHFPL6Q9Y693 200 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 LAMA1P25391 3075 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 IGKV1D-8A0A087WSZ0 117 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 TRGC2P03986 189 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 OR5AC1P0C628 307 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 GLIPR1P48060 266 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 CASP6P55212 293 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 CHAF1BQ13112 559 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SP6Q3SY56 376 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 C9orf40Q8IXQ3 194 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 RTN4IP1Q8WWV3 396 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 TSLPQ969D9 159 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 KLHL13Q9P2N7 655 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 A0A1W2PQF6 199 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF728P0DKX0 622 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SFTPDP35247 375 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms