RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 H3BQ15 152 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 NR2C1P13056 603 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 GABRR1P24046 479 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 ARL4DP49703 201 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 FBXW4P57775 412 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 SP6Q3SY56 376 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 Q3ZCU0 254 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 SLC25A53Q5H9E4 307 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 C9orf152Q5JTZ5 239 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 LYZL2Q7Z4W2 148 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 TOMM40LQ969M1 308 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 Q96M66 194 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 ANGPTL4Q9BY76 406 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 GFOD1Q9NXC2 390 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 KIAA1456Q9P272 454 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 HSF4Q9ULV5 492 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 F5P12259 2224 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ELOA3CA0A087WX78 387 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 TRAF3IP2O43734 574 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 SFTPDP35247 375 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 TAGLN2P37802 199 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 UBE2KP61086 200 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 NHLH2Q02577 135 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 OGFOD3Q6PK18 319 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF574Q6ZN55 896 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 WDR77Q9BQA1 342 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 NELFAQ9H3P2 528 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF160Q9HCG1 818 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF726A6NNF4 738 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 TLX3O43711 291 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 QDPRP09417 244 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 GPX4P36969 197 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 GUCA1AP43080 201 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 LSM6P62312 80 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 RAB39BQ96DA2 213 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 LIN37Q96GY3 246 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 LYZL4Q96KX0 146 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 ZDHHC8Q9ULC8 765 aa12.94□□□□□ -0.34
CACNA1A-220ENST00000635988 IFITM10A6NMD0 228 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 HSPA12AO43301 675 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 EWSR1Q01844 656 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 SMAD4Q13485 552 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST3H3Q16695 136 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 Q6ZSR3 168 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 CCDC71LQ8N9Z2 235 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 OR14L1PQ8NHC6 308 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 SLAMF9Q96A28 289 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 BOD1Q96IK1 185 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 SPSB2Q99619 263 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 RARRES2Q99969 163 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 RCL1Q9Y2P8 373 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 FAM230AA0A1W2PPH8 454 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 HIST1H1BP16401 226 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 ANOS1P23352 680 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 VEGFBP49765 207 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 UCP3P55916 312 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 ELOBQ15370 118 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 OR2G3Q8NGZ4 309 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 HDHD3Q9BSH5 251 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 SLC2A9Q9NRM0 540 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 MMP17Q9ULZ9 603 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 MMP24Q9Y5R2 645 aa12.93□□□□□ -0.34
CACNA1A-220ENST00000635988 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 EFNA2O43921 213 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 HEXBP07686 556 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 FAHP16930 419 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 SRPXP78539 464 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 CARFQ8N187 725 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 OR2C3Q8N628 320 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 GJC3Q8NFK1 279 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 OR52M1Q8NGK5 317 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 PIGQQ9BRB3 760 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 DUSP15Q9H1R2 295 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 LIME1Q9H400 295 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 PIAS3Q9Y6X2 628 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF587BE7ETH6 402 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 HSD17B6O14756 317 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 RAMP1O60894 148 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 PITX3O75364 302 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 CDS2O95674 445 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 IGLV3-19P01714 112 aa12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 SRP19P09132 144 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-220ENST00000635988 RD3LP0DJH9 198 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms