RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 NOX4Q9NPH5 578 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 TMEM100Q9NV29 134 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
LINC00339-208ENST00000634934 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
LINC00339-208ENST00000634934 LINC00862A6NCI5 91 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 ZNF850A8MQ14 1090 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 CST4P01036 141 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
LINC00339-208ENST00000634934 PRDX4Q13162 271 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 MST1LQ2TV78 715 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 DMRTC1Q5HYR2 192 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 CLVS2Q5SYC1 327 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 GLCCI1Q86VQ1 547 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 SERPINA12Q8IW75 414 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
LINC00339-208ENST00000634934 C10orf35Q96D05 121 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 CBLN4Q9NTU7 201 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 NUDT15Q9NV35 164 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 PDZD2O15018 2839 aa12.31□□□□□ -0.44
LINC00339-208ENST00000634934 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 ZSCAN5BA6NJL1 495 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 M0R233 179 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 SPRY3O43610 288 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 GMDSO60547 372 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 NRASP01111 189 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 SOD3P08294 240 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 DANCRP0C864 163 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 NAT2P11245 290 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 SRMP19623 302 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 ZNF81P51508 661 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 DHODHQ02127 395 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 FCN2Q15485 313 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 OR8G1Q15617 311 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 SWI5Q1ZZU3 235 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 Q6ZR03 302 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 OR2Z1Q8NG97 314 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 OR5D14Q8NGL3 314 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 OR13C9Q8NGT0 318 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 OR13G1Q8NGZ3 307 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 C17orf50Q8WW18 174 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 NRGNQ92686 78 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 PIGTQ969N2 578 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 HIST1H2AAQ96QV6 131 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 BEX2Q9BXY8 128 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 TAS2R4Q9NYW5 299 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 CKLFQ9UBR5 152 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
LINC00339-208ENST00000634934 ANXA2P2A6NMY6 339 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 H0YL77 283 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 PIN1P1O15428 100 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 FABP7O15540 132 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 PEX14O75381 377 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 CD8AP01732 235 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 PLCXD3Q63HM9 321 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 ZDHHC23Q8IYP9 409 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 OR5H6Q8NGV6 325 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 OR8S1Q8NH09 359 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 NPRL2Q8WTW4 380 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 ASB13Q8WXK3 278 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 ADAT1Q9BUB4 502 aaKnown RBP12.29□□□□□ -0.44
LINC00339-208ENST00000634934 CHST5Q9GZS9 411 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 CGGBP1Q9UFW8 167 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-208ENST00000634934 HSPB11Q9Y547 144 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 MPC1Q9Y5U8 109 aa12.29□□□□□ -0.44
LINC00339-208ENST00000634934 IL5P05113 134 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 C4BPBP20851 252 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 HTR2BP41595 481 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 DGCR2P98153 550 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 SSBP1Q04837 148 aaKnown RBP12.28□□□□□ -0.44
LINC00339-208ENST00000634934 UBE2V2Q15819 145 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 METTL11BQ5VVY1 283 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 TMEM42Q69YG0 159 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 DTX2Q86UW9 622 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
LINC00339-208ENST00000634934 OR11H7Q8NGC8 314 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 SNAPC3Q92966 411 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 ELMOD3Q96FG2 381 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 SORCS2Q96PQ0 1159 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-208ENST00000634934 TCF7L1Q9HCS4 588 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 NOP16Q9Y3C1 178 aaKnown RBP12.28□□□□□ -0.44
LINC00339-208ENST00000634934 NOTCH2Q04721 2471 aa12.28□□□□□ -0.44
LINC00339-208ENST00000634934 TRAV8-7A0A075B6U6 113 aa12.27□□□□□ -0.44
LINC00339-208ENST00000634934 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.27□□□□□ -0.44
LINC00339-208ENST00000634934 C17orf100A8MU93 164 aa12.27□□□□□ -0.44
LINC00339-208ENST00000634934 SNRPGP15A8MWD9 76 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms