RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
LINC00339-206ENST00000634451 OR5A2Q8NGI9 324 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 MYDGFQ969H8 173 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 REEP1Q9H902 201 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 HES4Q9HCC6 221 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00339-206ENST00000634451 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
LINC00339-206ENST00000634451 A0A0U1RQV5 110 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 FAM172BPA6NC97 362 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 M0R129 80 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 F2RL2O00254 374 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 NRASP01111 189 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 IGHV1-8P0DP01 117 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 EDDM3BP56851 147 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 RPS7P62081 194 aaKnown RBP10.29□□□□□ -0.76
LINC00339-206ENST00000634451 SLC34A1Q06495 639 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 RIPPLY1Q0D2K3 151 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 C18orf65Q6ZTR6 163 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
LINC00339-206ENST00000634451 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 TRMT10AQ8TBZ6 339 aaKnown RBP10.29□□□□□ -0.76
LINC00339-206ENST00000634451 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 MALSU1Q96EH3 234 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 SLC22A13Q9Y226 551 aa10.29□□□□□ -0.76
LINC00339-206ENST00000634451 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
LINC00339-206ENST00000634451 IGKV1-27A0A075B6S5 117 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 A0A1B0GTI1 187 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 K7N7A8 449 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 SNX3O60493 162 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 SRSF10O75494 262 aaKnown RBP10.28□□□□□ -0.76
LINC00339-206ENST00000634451 IGHA1P01876 353 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 PF4P02776 101 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 LPLP06858 475 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 CCDC159P0C7I6 412 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 CALCBP10092 127 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ACTA2P62736 377 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ACTG2P63267 376 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ACTC1P68032 377 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ACTA1P68133 377 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 APOFQ13790 326 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ZNF684Q5T5D7 378 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 TMEM42Q69YG0 159 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 LCN8Q6JVE9 175 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 CD300LDQ6UXZ3 194 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 FOXRED1Q96CU9 486 aaPredicted RBP10.28□□□□□ -0.76
LINC00339-206ENST00000634451 CHST6Q9GZX3 395 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ACTR3BQ9P1U1 418 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 TAGLN3Q9UI15 199 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 ENPP5Q9UJA9 477 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 LAMP5Q9UJQ1 280 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 GTF2A1LQ9UNN4 478 aa10.28□□□□□ -0.76
LINC00339-206ENST00000634451 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 FAM90A22PA8MWA6 464 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.77
LINC00339-206ENST00000634451 AMY1AP04745 511 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 AMY2AP04746 511 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 PAICSP22234 425 aaKnown RBP10.27□□□□□ -0.77
LINC00339-206ENST00000634451 PRKACGP22612 351 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 GDNFP39905 211 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 ESRRGP62508 458 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 OR14K1Q8NGZ2 314 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 NDNFQ8TB73 568 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 GIPC3Q8TF64 312 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 SLAMF9Q96A28 289 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 APOL4Q9BPW4 351 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
LINC00339-206ENST00000634451 MTCH1Q9NZJ7 389 aa10.27□□□□□ -0.77
LINC00339-206ENST00000634451 NUFIP1Q9UHK0 495 aaKnown RBP10.27□□□□□ -0.77
LINC00339-206ENST00000634451 hCG_1809904A0A1W2PP81 198 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 A0A1W2PPE2 198 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 FAM230AA0A1W2PPH8 454 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 A0A1W2PR64 198 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 A0A1W2PRV1 198 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 GSC2O15499 205 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 PRODHO43272 600 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 DHRS3O75911 302 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 MPZP25189 248 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 DUSP1P28562 367 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 DYNLT3P51808 116 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 SLC35A2P78381 396 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 CDK5Q00535 292 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 ODF4Q2M2E3 257 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 ZNF676Q8N7Q3 588 aa10.26□□□□□ -0.77
LINC00339-206ENST00000634451 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms