RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 VEGFCP49767 419 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 TNK1Q13470 666 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 ZNF273Q14593 569 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 KISS1Q15726 138 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 PNLIPRP3Q17RR3 467 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 TSPO2Q5TGU0 170 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 RTL6Q6ICC9 239 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 OR10K2Q6IF99 312 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 NAA40Q86UY6 237 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 STEAP2Q8NFT2 490 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 ZFAND1Q8TCF1 268 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 SSC4DQ8WTU2 575 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 ST6GALNAC6Q969X2 333 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 APH1AQ96BI3 265 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 REEP6Q96HR9 211 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 RNF170Q96K19 258 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 ASCL2Q99929 193 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 GINS4Q9BRT9 223 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 TMEM59Q9BXS4 323 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 SLA2Q9H6Q3 261 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 ASCL3Q9NQ33 180 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 IFT46Q9NQC8 304 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 HIF1ANQ9NWT6 349 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 MYEF2Q9P2K5 600 aaKnown RBP6.23□□□□□ -1.41
BRCA1-230ENST00000634433 FLVCR2Q9UPI3 526 aa6.23□□□□□ -1.41
BRCA1-230ENST00000634433 MEIKINA0A087WXM9 373 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 FAM90A20PA6NIJ5 464 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 WRBO00258 174 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 RGS13O14921 159 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 CDC14BO60729 498 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 MPIG6BO95866 241 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 CD74P04233 296 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 DBHP09172 617 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 MZT1Q08AG7 82 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 UNC119Q13432 240 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TGIF1Q15583 401 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 LBHQ53QV2 105 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TMEM255AQ5JRV8 349 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TMEM88Q6PEY1 159 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TRAPPC6BQ86SZ2 158 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SKA3Q8IX90 412 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ZNF100Q8IYN0 542 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SPICQ8N5J4 248 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TMEM116Q8NCL8 245 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 OR8S1Q8NH09 359 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 C5orf30Q96GV9 206 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TECTBQ96PL2 329 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 NKX3-1Q99801 234 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SOX7Q9BT81 388 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ALX4Q9H161 411 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-230ENST00000634433 CALHM2Q9HA72 323 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 PLEKHA6Q9Y2H5 1048 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ZNF175Q9Y473 711 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 NCKAP5O14513 1909 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 IGKV1-9A0A0C4DH69 117 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 MEIS3P1A6NDR6 274 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TMEM235A6NFC5 223 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 CRTAPO75718 401 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-230ENST00000634433 FCGR2AP12318 317 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 FAHP16930 419 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ARR3P36575 388 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 OR3A4PP47883 348 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 CDC34P49427 236 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-230ENST00000634433 TNFSF10P50591 281 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 GNG2P59768 71 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ACTBL2Q562R1 376 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 OR51S1Q8NGJ8 323 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 FNDC9Q8TBE3 224 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 RAB3CQ96E17 227 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ELMOD3Q96FG2 381 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 PRRT1Q99946 306 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SELENOIQ9C0D9 397 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 LPAR5Q9H1C0 372 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 ZDHHC11Q9H8X9 412 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SLC7A10Q9NS82 523 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 MBD2Q9UBB5 411 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 SLC7A11Q9UPY5 501 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
BRCA1-230ENST00000634433 WDFY3Q8IZQ1 3526 aa6.21□□□□□ -1.41
BRCA1-230ENST00000634433 E9PLN8 166 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 FABP7O15540 132 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 RLN1P04808 185 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MMP7P09237 267 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MPZP25189 248 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 CCL11P51671 97 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 UBE2V2Q15819 145 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SNAI3Q3KNW1 292 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MOGAT2Q3SYC2 334 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 C4orf17Q53FE4 359 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 RNASE10Q5GAN6 216 aaKnown RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 PABPC1L2AQ5JQF8 200 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ATP1A1-AS1Q5TC04 95 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF626Q68DY1 528 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 IGFL2Q6UWQ7 119 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 STX12Q86Y82 276 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 BPIFB2Q8N4F0 458 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 BEST4Q8NFU0 473 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 OR11H7Q8NGC8 314 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms