RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RELL2Q8NC24 303 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-211ENST00000629427 CXXC4Q9H2H0 198 aa10.49□□□□□ -0.73
SHPRH-211ENST00000629427 COA4Q9NYJ1 87 aa10.49□□□□□ -0.73
SHPRH-211ENST00000629427 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
SHPRH-211ENST00000629427 A0A1W2PN81 502 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 ADAM20O43506 726 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 CHRNA7P36544 502 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 PTGFRP43088 359 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 RPL34P49207 117 aaKnown RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 FNDC7Q5VTL7 733 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 PTOV1Q86YD1 416 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 ZFP64Q9NPA5 681 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TCRBV5S2A0A599 114 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 CELA2BP08218 269 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 IL9P15248 144 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TAGLNQ01995 201 aaKnown RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 Q7L0L9 218 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR1B1Q8NGR6 318 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 KIF13BQ9NQT8 1826 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TPPP2P59282 170 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 ZNF793Q6ZN11 406 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR52L2PQ8NGH6 319 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 S100A8P05109 93 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TOMM34Q15785 309 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR2A5Q96R48 311 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TRAPPC2P0DI81 140 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 TRAPPC2BP0DI82 140 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 ORM2P19652 201 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 MMP15P51511 669 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 NEIL1Q96FI4 390 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-211ENST00000629427 LURAP1Q96LR2 239 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 RSRP1Q9BUV0 290 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 MMP25Q9NPA2 562 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR1A1Q9P1Q5 309 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 A0A1B0GUH1 482 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 PJVKQ0ZLH3 352 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR8B3Q8NGG8 313 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 CXorf58Q96LI9 332 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 OR8B2Q96RD0 313 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 NIT2Q9NQR4 276 aa10.48□□□□□ -0.73
SHPRH-211ENST00000629427 RALGAPA1Q6GYQ0 2036 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 GALNSP34059 522 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CLDN20P56880 219 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 OR5R1Q8NH85 324 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 TRAV38-1A0A0B4J264 116 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 MASP2O00187 686 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 SLC17A2O00624 439 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 GABRA1P14867 456 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 MDH2P40926 338 aaKnown RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 LYZP61626 148 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 B3GNTL1Q67FW5 361 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 TRAT1Q6PIZ9 186 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 TCTE3Q8IZS6 198 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 TMEM272A0A1B0GTI8 110 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 SPINK4O60575 86 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CTSVO60911 334 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 GYPAP02724 150 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 LPAR6P43657 344 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 C3AR1Q16581 482 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 MRGPRDQ8TDS7 321 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 LHX9Q9NQ69 397 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 NHSL1Q5SYE7 1610 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 PYCARD-AS1I3L0S3 204 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 SMIM18P0DKX4 95 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CALCRP30988 508 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CDC34P49427 236 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 CDX2Q99626 313 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 OR6C3Q9NZP0 311 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 F2RL2O00254 374 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 RAE1P78406 368 aaKnown RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 ZNF574Q6ZN55 896 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-211ENST00000629427 RASL11BQ9BPW5 248 aa10.47□□□□□ -0.73
SHPRH-211ENST00000629427 TUBAL3A6NHL2 446 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 ZNF205O95201 554 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 WNT1P04628 370 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 OR4A8P0C604 315 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 WDR38Q5JTN6 314 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 NHLRC1Q6VVB1 395 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TMEM18Q96B42 140 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 UQCC2Q9BRT2 126 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 GSX2Q9BZM3 304 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TOX3O15405 576 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 CADM3Q8N126 398 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 PATE4P0C8F1 98 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TNXAQ16473 311 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 JMJD6Q6NYC1 403 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms