RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PHF1O43189 567 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-220ENST00000627371 NXPH2O95156 264 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 IGFBP3P17936 291 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-220ENST00000627371 FSTP19883 344 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 POU3F4P49335 361 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 NPY4RP50391 375 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 ERVK11-1P61568 191 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 PPP3R1P63098 170 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 EMX1Q04741 257 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-220ENST00000627371 ATPAF1Q5TC12 328 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-220ENST00000627371 LIPKQ5VXJ0 399 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 CRIP3Q6Q6R5 217 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 RNF144BQ7Z419 303 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 OR5T2Q8NGG2 359 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 ANGPTL6Q8NI99 470 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 RFT1Q96AA3 541 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 CPNE2Q96FN4 548 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-220ENST00000627371 CEP19Q96LK0 163 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 DERL3Q96Q80 235 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 MTCH1Q9NZJ7 389 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 CLN8Q9UBY8 286 aa16.91■□□□□ 0.3
PTCD3-220ENST00000627371 ZFHX3Q15911 3703 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 PPIAL4CA0A0B4J2A2 164 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 OR2AT4A6NND4 320 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 TMPRSS2O15393 492 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 MAGEB3O15480 346 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 GPX5O75715 221 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 CYB5AP00167 134 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 CPEP16870 476 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 AMY2BP19961 511 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 PCMT1P22061 227 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 MAPK3P27361 379 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-220ENST00000627371 PDZK1IP1Q13113 114 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 KISS1Q15726 138 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 KCTD21Q4G0X4 260 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 WDR25Q64LD2 544 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-220ENST00000627371 SLC36A1Q7Z2H8 476 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 MKXQ8IYA7 352 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 SPARTQ8N0X7 666 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 SLAMF9Q96A28 289 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 ORAI1Q96D31 301 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 CCL13Q99616 98 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 TMED9Q9BVK6 235 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 TMEM138Q9NPI0 162 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 CKLFQ9UBR5 152 aa16.9■□□□□ 0.3
PTCD3-220ENST00000627371 NKX6-3A6NJ46 265 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 ALDOBP05062 364 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 PSG2P11465 335 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 ZP1P60852 638 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 ZNF773Q6PK81 442 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 ZNF788Q6ZQV5 615 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 Q8IYB0 196 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 BATF2Q8N1L9 274 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 OR52N4Q8NGI2 321 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 OR5V1Q9UGF6 321 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 ZNF222Q9UK12 451 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 FOXJ3Q9UPW0 622 aa16.89■□□□□ 0.29
PTCD3-220ENST00000627371 IGKV1D-17A0A075B6S4 117 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 TRAV8-7A0A075B6U6 113 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 A0A0G2JMP0 313 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 A0A0X1KG70 313 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 A0A1B0GW55 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 A0A1W2PPK0 400 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 F8VVB4 439 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 F8VWA3 439 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 PIN1P1O15428 100 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 SPRY1O43609 319 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-220ENST00000627371 SC5DO75845 299 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L2P0CJ85 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L3P0CJ86 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L4P0CJ87 422 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L5P0CJ88 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L6P0CJ89 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L7P0CJ90 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 GATA3P23771 443 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 BDKRB2P30411 391 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 TGFBR2P37173 567 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 ACSM3Q53FZ2 586 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4L9Q6RFH8 374 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-220ENST00000627371 UNQ9370/PRO34162Q6UXP9 181 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 PHC2Q8IXK0 858 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 SAXO1Q8IYX7 474 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 FAM216BQ8N7L0 139 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 ZSCAN4Q8NAM6 433 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-220ENST00000627371 OR4M2Q8NGB6 313 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 OR5D18Q8NGL1 313 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 GAFA1Q96PS6 74 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 SMURF1Q9HCE7 757 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 NOX4Q9NPH5 578 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 DUX4Q9UBX2 424 aa16.88■□□□□ 0.29
PTCD3-220ENST00000627371 TRAPPC2LH3BP13 241 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 DVL1O14640 695 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 FCN3O75636 299 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 INMTO95050 263 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 KNG1P01042 644 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 TFF1P04155 84 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 BCL3P20749 454 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 PSMA1P25786 263 aaKnown RBP16.87■□□□□ 0.29
PTCD3-220ENST00000627371 INSL4Q14641 139 aa16.87■□□□□ 0.29
PTCD3-220ENST00000627371 TRAM1Q15629 374 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms