RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZP1P60852 638 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 SSX1Q16384 188 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 KCTD21Q4G0X4 260 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 FAM27D1Q5T7N8 215 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 UNQ9370/PRO34162Q6UXP9 181 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 SLC25A26Q70HW3 274 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF367Q7RTV3 350 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 ANGPTL6Q8NI99 470 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 UFD1Q92890 307 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 DACT3Q96B18 629 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-217ENST00000621474 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 PPIL3Q9H2H8 161 aaKnown RBP11.92□□□□□ -0.5
CBWD3-217ENST00000621474 NLKQ9UBE8 527 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 KAAG1Q9UBP8 84 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF222Q9UK12 451 aa11.92□□□□□ -0.5
CBWD3-217ENST00000621474 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-217ENST00000621474 IGKV1D-17A0A075B6S4 117 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 PHF1O43189 567 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-217ENST00000621474 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-217ENST00000621474 RAB3AP20336 220 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 NPBWR2P48146 333 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 RPS25P62851 125 aaKnown RBP11.91□□□□□ -0.5
CBWD3-217ENST00000621474 LCN2P80188 198 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 PAX2Q02962 417 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 KISS1Q15726 138 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 ATPAF1Q5TC12 328 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-217ENST00000621474 UBE2UQ5VVX9 321 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 FAM166AQ6J272 317 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 OR5D18Q8NGL1 313 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 SLAMF9Q96A28 289 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 TMEM186Q96B77 213 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-217ENST00000621474 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
CBWD3-217ENST00000621474 OR2AT4A6NND4 320 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 INAFM1C9JVW0 142 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 ADAM20O43506 726 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 INMTO95050 263 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 PSG2P11465 335 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 SELLP14151 372 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 POU3F4P49335 361 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-217ENST00000621474 KCNJ8Q15842 424 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF773Q6PK81 442 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 TMEM91Q6ZNR0 172 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 OR51F2Q8NH61 342 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 TMEM203Q969S6 136 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 TMIGD2Q96BF3 282 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 GAFA1Q96PS6 74 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 CCL13Q99616 98 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-217ENST00000621474 NOX4Q9NPH5 578 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 MMP26Q9NRE1 261 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 RASL12Q9NYN1 266 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 SETD2Q9BYW2 2564 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-217ENST00000621474 DSCAML1Q8TD84 2053 aa11.9□□□□□ -0.5
CBWD3-217ENST00000621474 A8MV72 311 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 GABRPO00591 440 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 NDUFA2O43678 99 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 ALDOBP05062 364 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 HCKP08631 526 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 CPT2P23786 658 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 TGFBR2P37173 567 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 PITPNBP48739 271 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 ESCO2Q56NI9 601 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 WDR25Q64LD2 544 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 C1QL2Q7Z5L3 287 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 CEP19Q96LK0 163 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 RBFOX1Q9NWB1 397 aaKnown RBP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 MAB21L2Q9Y586 359 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 NIPBLQ6KC79 2804 aaeCLIP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 FOXH1O75593 365 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 NXPH2O95156 264 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 SFTPBP07988 381 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 BCL3P20749 454 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 CEBPDP49716 269 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-217ENST00000621474 GNB2P62879 340 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 DGUOKQ16854 277 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 SMIM21Q3B7S5 101 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms