RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 OR5B21A6NL26 309 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 H0YAE9 185 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 DHRS3O75911 302 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 PIPP12273 146 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ANXA8P13928 327 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 HAAOP46952 286 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
CPNE3-210ENST00000621245 EFNB2P52799 333 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 CAPZA1P52907 286 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 DLX6P56179 175 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 CXCR4P61073 352 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 EFNB1P98172 346 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 RIPPLY1Q0D2K3 151 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-210ENST00000621245 SNCBQ16143 134 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ODF4Q2M2E3 257 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 AADACL4Q5VUY2 407 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 NCR3LG1Q68D85 454 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 TMEM42Q69YG0 159 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF322Q6U7Q0 402 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF782Q6ZMW2 699 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ASRGL1Q7L266 308 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 TCF23Q7RTU1 214 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ANGPTL5Q86XS5 388 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 SLC35F2Q8IXU6 374 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 LYG1Q8N1E2 194 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 TCEANCQ8N8B7 351 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 OR14K1Q8NGZ2 314 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 NPRL2Q8WTW4 380 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 HIST1H2AAQ96QV6 131 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 TBX5Q99593 518 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 MROQ9BYG7 248 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 IL36RNQ9UBH0 155 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 ENPP5Q9UJA9 477 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 V9GYS6 101 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 IGKV1-27A0A075B6S5 117 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 ANKRD34BA5PLL1 514 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 BTBD17A6NE02 478 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 ANKRD61A6NGH8 418 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 ACOD1A6NK06 481 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 LOC110117498-PIK3R3F6TDL0 507 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 G3V4G9 280 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 J3QT63 122 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 NRASP01111 189 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 PRDX2P32119 198 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 ACSM1Q08AH1 577 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 LRRC75BQ2VPJ9 315 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 TM4SF20Q53R12 229 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF684Q5T5D7 378 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 BCL2L15Q5TBC7 163 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 LCN1P1Q5VSP4 162 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 SLX4IPQ5VYV7 408 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 C12orf73Q69YU5 71 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 KCTD18Q6PI47 426 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-210ENST00000621245 DEGS2Q6QHC5 323 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 MEPCEQ7L2J0 689 aaKnown RBP9.27□□□□□ -0.93
CPNE3-210ENST00000621245 OR5R1Q8NH85 324 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 TRMT10AQ8TBZ6 339 aaKnown RBP9.27□□□□□ -0.93
CPNE3-210ENST00000621245 IL4I1Q96RQ9 567 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 NRIP2Q9BQI9 281 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 CADM1Q9BY67 442 aaKnown RBP9.27□□□□□ -0.93
CPNE3-210ENST00000621245 HES4Q9HCC6 221 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 OR14J1Q9UGF5 321 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 OR52A1Q9UKL2 312 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 CAB39Q9Y376 341 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-210ENST00000621245 R4GMQ9 66 aa9.27□□□□□ -0.93
CPNE3-210ENST00000621245 HUWE1Q7Z6Z7 4374 aaKnown RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ZAR1LA6NP61 321 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 GYG2O15488 501 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF254O75437 659 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 INMTO95050 263 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 RPP14O95059 124 aaKnown RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 NXPH2O95156 264 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 GABRA5P31644 462 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 POLR2IP36954 125 aaKnown RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 TGFBR2P37173 567 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 RAB13P51153 203 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ERVK11-1P61568 191 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ESRRGP62508 458 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 RPL31P62899 125 aaKnown RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 SMIM21Q3B7S5 101 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF829Q3KNS6 432 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 CLVS2Q5SYC1 327 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 CCBE1Q6UXH8 406 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-210ENST00000621245 Q6ZSR3 168 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ELMOD2Q8IZ81 293 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 KLHDC1Q8N7A1 406 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 OR51G2Q8NGK0 314 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 OR5K1Q8NHB7 308 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF671Q8TAW3 534 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 FBLN5Q9UBX5 448 aa9.26□□□□□ -0.93
CPNE3-210ENST00000621245 GSC2O15499 205 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 NOS1APO75052 506 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-210ENST00000621245 DNAJC8O75937 253 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-210ENST00000621245 TK1P04183 234 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 ATP6V1B1P15313 513 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms