RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ERVK11-1P61568 191 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 GPR107Q5VW38 600 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 ACP7Q6ZNF0 438 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 SLC16A12Q6ZSM3 486 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 LRRC28Q86X40 367 aaPredicted RBP9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 FAM90A1Q86YD7 464 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 MKXQ8IYA7 352 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 C1orf87Q8N0U7 546 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 OR4D6Q8NGJ1 314 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 OR51F2Q8NH61 342 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 CLDND2Q8NHS1 167 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 TIMD4Q96H15 378 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 CEP19Q96LK0 163 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 NRIP2Q9BQI9 281 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 TMEM246Q9BRR3 403 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 REG4Q9BYZ8 158 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 CNTD2Q9H8S5 307 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 RBFOX1Q9NWB1 397 aaKnown RBP9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 ING4Q9UNL4 249 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 DOCK11Q5JSL3 2073 aa9.15□□□□□ -0.94
POLR2J3-221ENST00000621093 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 CCDC168Q8NDH2 2452 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 A0A1B0GW55 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 A0A1W2PP11 408 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 TNFRSF13BO14836 293 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 SMAD7O15105 426 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 AIREO43918 545 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 NOS1APO75052 506 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 KDM4BO94953 1096 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 SFTPBP07988 381 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 AMY2BP19961 511 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 MYL9P24844 172 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 MDH2P40926 338 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 PTGFRP43088 359 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 CAV3P56539 151 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 ZNF404Q494X3 552 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 TEX36Q5VZQ5 186 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 METAP1DQ6UB28 335 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 GPR141Q7Z602 305 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 SLITRK2Q9H156 845 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 ELL3Q9HB65 397 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 HES4Q9HCC6 221 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 SMURF1Q9HCE7 757 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 SCOCQ9UIL1 159 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 MRPS28Q9Y2Q9 187 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 POLDIP2Q9Y2S7 368 aa9.14□□□□□ -0.95
POLR2J3-221ENST00000621093 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 A0A0G2JK05 382 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 MEGF11A6BM72 1044 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CEACAM18A8MTB9 384 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 TRAPPC2LH3BP13 241 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 FCN3O75636 299 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 NXPH2O95156 264 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 HTR3BO95264 441 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CYB5AP00167 134 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 ACAA1P09110 424 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CD37P11049 281 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 PSG2P11465 335 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 SELLP14151 372 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 PRKACAP17612 351 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 USF1P22415 310 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 DUSP1P28562 367 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 SDC2P34741 201 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 RPL5P46777 297 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CLDN12P56749 244 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 SEC61A1P61619 476 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 LMO4P61968 165 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 NCS1P62166 190 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 MXD1Q05195 221 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 PDCD1Q15116 288 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 HES5Q5TA89 166 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 GLT8D1Q68CQ7 371 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 GLIPR1L1Q6UWM5 242 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 ASCL4Q6XD76 172 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 SAXO1Q8IYX7 474 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 FGFRL1Q8N441 504 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 NKAIN3Q8N8D7 197 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 ZSCAN4Q8NAM6 433 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 EMG1Q92979 244 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 C1orf147Q96MC9 270 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 KCTD7Q96MP8 289 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CCL13Q99616 98 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 GAL3ST1Q99999 423 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 NLKQ9UBE8 527 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 DNAJB11Q9UBS4 358 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
POLR2J3-221ENST00000621093 GSTK1Q9Y2Q3 226 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms