RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SNRPGP15A8MWD9 76 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 RER1O15258 196 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 NME2P1O60361 137 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 TRGC1P0CF51 173 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ANOS1P23352 680 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 UBE2KP61086 200 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 MST1LQ2TV78 715 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 EMC4Q5J8M3 183 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 BAP18Q8IXM2 172 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 SLC35G3Q8N808 338 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 NUDT10Q8NFP7 164 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 C11orf40Q8WZ69 217 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 NUDT11Q96G61 164 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 OR6C1Q96RD1 312 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ZNF576Q9H609 170 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 F5H5K5 113 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 PGA4P0DJD7 388 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 PGA5P0DJD9 388 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 RPS2P15880 293 aaKnown RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 BCKDHBP21953 392 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 CD27P26842 260 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ARFRP1Q13795 201 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 PTCRAQ6ISU1 281 aaPredicted RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 CFAP161Q6P656 301 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ZNF813Q6ZN06 617 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 FAM185AQ8N0U4 392 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 EID2Q8N6I1 236 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 METTL8Q9H825 291 aaKnown RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 SLC5A6Q9Y289 635 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 NBEAQ8NFP9 2946 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 TEX13DA0A0J9YY54 714 aaPredicted RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 A0A1W2PPQ1 181 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 C20orf202A1L168 122 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ANKUB1A6NFN9 424 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 MS4A18H0YCH9 400 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 BCAT2O15382 392 aaPredicted RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 DUX1O43812 170 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 TSPAN2O60636 221 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 RAMP1O60894 148 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 TRAPPC6AO75865 159 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ZNF20P17024 532 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 MRPL49Q13405 166 aaKnown RBP9.44□□□□□ -0.9
CDH1-214ENST00000621016 RAB30Q15771 203 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 MS4A18Q3C1V0 323 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 ADGRE4PQ86SQ3 457 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 PLXDC1Q8IUK5 500 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 OR10G3Q8NGC4 313 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 TERB2Q8NHR7 220 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 MARCH1Q8TCQ1 289 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 GPX8Q8TED1 209 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 C15orf40Q8WUR7 153 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 FRZBQ92765 325 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 SLAMF6Q96DU3 332 aa9.44□□□□□ -0.9
CDH1-214ENST00000621016 VSTM2BA6NLU5 285 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 MKRN2OSH3BPM6 223 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 EFSO43281 561 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF208O43345 1280 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 OR2J2O76002 312 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 IL5P05113 134 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 PI4KAP42356 2102 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 CAV2P51636 162 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 CLRN1P58418 232 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 UBE2V2Q15819 145 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 C11orf87Q6NUJ2 197 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 CATSPERDQ86XM0 798 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF283Q8N7M2 679 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ASB17Q8WXJ9 295 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 VSIG4Q9Y279 399 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF705FA8MVS1 300 aaPredicted RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 C9J4A7 227 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF705DP0CH99 300 aaPredicted RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF705BP0CI00 300 aaPredicted RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 AGTR1P30556 359 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 CD96P40200 585 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 TLE4Q04727 773 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 TMEM176BQ3YBM2 270 aaPredicted RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 DCAF10Q5QP82 559 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 LY6G6FQ5SQ64 297 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 LEMD1Q68G75 181 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 ACOT7LQ6ZUV0 252 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 FAM57BQ71RH2 274 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 H1FNTQ75WM6 255 aaPredicted RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 ZNF519Q8TB69 540 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 PBDC1Q9BVG4 233 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 UPB1Q9UBR1 384 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 DKKL1Q9UK85 242 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
CDH1-214ENST00000621016 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
CDH1-214ENST00000621016 R4GMQ9 66 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms