RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PIGLQ9Y2B2 252 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 SPEGQ15772 3267 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 IGLV3-32A0A0A0MS00 114 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 F5H5K5 113 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 PPIHO43447 177 aaKnown RBP17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 MAS1LP35410 378 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 ACER2Q5QJU3 275 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 CARFQ8N187 725 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 GALNT14Q96FL9 552 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 YPEL4Q96NS1 127 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 KCNIP3Q9Y2W7 256 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 LAMA1P25391 3075 aa17.09■□□□□ 0.33
PDLIM3-212ENST00000620787 TRBV11-1A0A0K0K1C0 115 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF726A6NNF4 738 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 H7C1Q1 480 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 PRH1P02810 166 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 RAB5CP51148 216 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 RRADP55042 308 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 PLXDC2Q6UX71 529 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 Q6ZSR3 168 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 CD300LFQ8TDQ1 290 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 PIGQQ9BRB3 760 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 KCNJ16Q9NPI9 418 aa17.08■□□□□ 0.33
PDLIM3-212ENST00000620787 IGHV1OR15-9A0A0B4J2B8 117 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 OR5H15A6NDH6 313 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF205O95201 554 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF728P0DKX0 622 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 PPP1CCP36873 323 aaKnown RBP17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 LSM6P62312 80 aaKnown RBP17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 RSPO1Q2MKA7 263 aaPredicted RBP17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 PLXDC1Q8IUK5 500 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 LRTM2Q8N967 370 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 C18orf12Q96KH6 178 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 FAAP24Q9BTP7 215 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 FGF21Q9NSA1 209 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF581Q9P0T4 197 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 AK3Q9UIJ7 227 aa17.08■□□□□ 0.32
PDLIM3-212ENST00000620787 OR13C7P0DN81 318 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 SFTPDP35247 375 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 TSPO2Q5TGU0 170 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF565Q8N9K5 539 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 HSD17B11Q8NBQ5 300 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 OR10G3Q8NGC4 313 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 OR52M1Q8NGK5 317 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 RTN4IP1Q8WWV3 396 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 PBDC1Q9BVG4 233 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 NECAP2Q9NVZ3 263 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 HDGFL3Q9Y3E1 203 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 B3GALT1Q9Y5Z6 326 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 AQP7P3A6NL99 342 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 OPRM1P35372 400 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 CLDN17P56750 224 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 RAB1AP62820 205 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 NHLH2Q02577 135 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 ENDOGQ14249 297 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 RSPO4Q2I0M5 234 aaPredicted RBP17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 C1QL4Q86Z23 238 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 METTL7AQ9H8H3 244 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
PDLIM3-212ENST00000620787 A0A1B0GW64 132 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 K7N7A8 449 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 MSR1P21757 451 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 CD27P26842 260 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 RPS23P62266 143 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 IL13RA2Q14627 380 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 CLINT1Q14677 625 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 ABCA11PQ4W5N1 156 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 LIAT1Q6ZQX7 453 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 OR2M3Q8NG83 312 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 MARS2Q96GW9 593 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 SUCNR1Q9BXA5 334 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 NXT1Q9UKK6 140 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF850A8MQ14 1090 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 DUX1O43812 170 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 HEXBP07686 556 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 SHHQ15465 462 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 PHYHD1Q5SRE7 291 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 HIST2H3AQ71DI3 136 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 GJC3Q8NFK1 279 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 REEP6Q96HR9 211 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
PDLIM3-212ENST00000620787 EML6Q6ZMW3 1958 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 NSG1A0A0A6YYJ2 146 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 A0A1B0GV50 99 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 CHATP28329 748 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 DUSP1P28562 367 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 CSNK1A1P48729 337 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 TMEM176BQ3YBM2 270 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 PHLDA2Q53GA4 152 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 NCMAPQ5T1S8 102 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 TMEM182Q6ZP80 229 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 MSI2Q96DH6 328 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 GPR173Q9NS66 373 aa17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 RCL1Q9Y2P8 373 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-212ENST00000620787 LOC102725191A0A1B0GVB3 256 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 FXYD4P59646 89 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 HNRNPKP61978 463 aaKnown RBP eCLIP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms