RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GNB1P62873 340 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 DCAF4L2Q8NA75 395 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 MRM2Q9UI43 246 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TMED3Q9Y3Q3 217 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CLDN16Q9Y5I7 305 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SHISA3A0PJX4 238 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SOCS1O15524 211 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ARL16Q0P5N6 197 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 DAZLQ92904 295 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PBOV1Q9GZY1 135 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CNTD2Q9H8S5 307 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 ADARB2Q9NS39 739 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 MARF1Q9Y4F3 1742 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 H0YGG7 62 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 CDKN2AP42771 156 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 FLT3LGP49771 235 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 BSXQ3C1V8 233 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM183AQ8IXX5 376 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 OR11L1Q8NGX0 322 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 RCC1LQ96I51 464 aaKnown RBP4.49□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BLQ99880 126 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 UQCR10Q9UDW1 63 aa4.49□□□□□ -1.69
VPS13D-214ENST00000620676 SERINC4A6NH21 518 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NPIPB9F8W1W9 429 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 AKR1A1P14550 325 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GLIPR1P48060 266 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 RPS15AP62244 130 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MICBQ29980 383 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 BPIFA4PQ86YQ2 179 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FGF13Q92913 245 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FLYWCH2Q96CP2 140 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TCTN2Q96GX1 697 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 DUS4LO95620 317 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GPR75O95800 540 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 POU2F2P09086 479 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FPR2P25090 351 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GCH1P30793 250 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 RELBQ01201 579 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ALKAL1Q6UXT8 129 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 Q6ZVH6 145 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 RPS4Y2Q8TD47 263 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR4C12Q96R67 309 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NDUFAF3Q9BU61 184 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PAGE4O60829 102 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PPP2CBP62714 309 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PPP2CAP67775 309 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CCL20P78556 96 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ISXQ2M1V0 245 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF774Q6NX45 483 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SLC35E1Q96K37 410 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GTSF1LQ9H1H1 148 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 KLKB1P03952 638 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FAHP16930 419 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FZD5Q13467 585 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF506Q5JVG8 444 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 EMG1Q92979 244 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MIEN1Q9BRT3 115 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SEMA5BQ9P283 1151 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TRAV39A0A0B4J263 110 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NDUFA2O43678 99 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PLPP2O43688 288 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ZFP36L2P47974 494 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 DCAF7P61962 342 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TEX30Q5JUR7 227 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SCARF2Q96GP6 870 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CABIN1Q9Y6J0 2220 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 C17orf112F2Z3M2 114 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NANOS3P60323 173 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SFTA2Q6UW10 78 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NIT1Q86X76 327 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CATSPERDQ86XM0 798 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 Q9N2K0 584 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ASIC5Q9NY37 505 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 RGPD1P0DJD0 1748 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SLC6A8P48029 635 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ADPRHP54922 357 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 RAG2P55895 527 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV3-15A0A0B4J1V0 119 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SLCO2B1O94956 709 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GNRH1P01148 92 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CST5P28325 142 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 LBHQ53QV2 105 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CDC20BQ86Y33 519 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms