RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 G3V2T6 193 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 K7N7A8 449 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 PRKYO43930 277 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 SRSF10O75494 262 aaKnown RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 SULT1C4O75897 302 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 CHRM2P08172 466 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 OR2T7P0C7T2 308 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 FCGR1AP12314 374 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 CCL1P22362 96 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 DAPP51397 102 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 PRB3Q04118 309 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 MEF2CQ06413 473 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 MFGE8Q08431 387 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 TMED1Q13445 227 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 AADACL4Q5VUY2 407 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 ASRGL1Q7L266 308 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 ENTHD1Q8IYW4 607 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 PNKDQ8N490 385 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 CD177Q8N6Q3 437 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 TCEANCQ8N8B7 351 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 OR14K1Q8NGZ2 314 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 UTP4Q969X6 686 aaKnown RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 ADI1Q9BV57 179 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 OSBPL10Q9BXB5 764 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 SEBOXQ9HB31 216 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-204ENST00000619445 ADGRL4Q9HBW9 690 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 ABCB10Q9NRK6 738 aa9.69□□□□□ -0.86
UPF3B-204ENST00000619445 A0A1B0GTI1 187 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 FAM90A8PA6NJQ4 464 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 SYNGR1O43759 233 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 TSPAN15O95858 294 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 CYB5AP00167 134 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 TFF1P04155 84 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 ALDOBP05062 364 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 FASP25445 335 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 FUT6P51993 359 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 DLX1P56177 255 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 ERVK11-1P61568 191 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 EFNB1P98172 346 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 ATP6AP1Q15904 470 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 C12orf73Q69YU5 71 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 GDPD3Q7L5L3 318 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 YIPF7Q8N8F6 280 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 ASCC1Q8N9N2 400 aaKnown RBP9.68□□□□□ -0.86
UPF3B-204ENST00000619445 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-204ENST00000619445 RPS4Y2Q8TD47 263 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 PP6455Q8WZ26 134 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 CFHR4Q92496 578 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 RFKQ969G6 155 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 AJUBAQ96IF1 538 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 CEP19Q96LK0 163 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 APOL4Q9BPW4 351 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 OR14J1Q9UGF5 321 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 SLC22A13Q9Y226 551 aa9.68□□□□□ -0.86
UPF3B-204ENST00000619445 hADV38S2A0JD32 116 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 PRR32B1ATL7 298 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 SYT7O43581 403 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 OPN1MWP04001 364 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 UBCP0CG48 685 aaKnown RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF728P0DKX0 622 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 OPN1MW2P0DN77 364 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 OPN1MW3P0DN78 364 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 ATP6V1E1P36543 226 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 DYNLT3P51808 116 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 EMX1Q04741 257 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 CNN3Q15417 329 aaKnown RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 LY6EQ16553 131 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 KDM4DQ6B0I6 523 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 PLEKHG7Q6ZR37 379 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 ZBTB49Q6ZSB9 765 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 FAM220AQ7Z4H9 259 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 OR8H2Q8N162 312 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 KLHDC1Q8N7A1 406 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 OR11H6Q8NGC7 330 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 PPP1R35Q8TAP8 253 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 BCAS4Q8TDM0 211 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 SLC7A6OSQ96CW6 309 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 SNX22Q96L94 193 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF488Q96MN9 340 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 MYCBPQ99417 103 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 TTTY10Q9BZA0 68 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 CHST5Q9GZS9 411 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 GABARAPL1Q9H0R8 117 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 GLS2Q9UI32 602 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 MRM2Q9UI43 246 aaKnown RBP9.67□□□□□ -0.86
UPF3B-204ENST00000619445 PLXNB1O43157 2135 aa9.67□□□□□ -0.86
UPF3B-204ENST00000619445 METTL15A6NJ78 407 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 XPNPEP2O43895 674 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
UPF3B-204ENST00000619445 COX7A1P24310 79 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 HTR1FP30939 366 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 OR12D2P58182 307 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 MINOS1Q5TGZ0 78 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF626Q68DY1 528 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 REC114Q7Z4M0 266 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms