RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	PTPRZ1	P23471	2315 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	hCG_1807616	A0A1W2PRN6	198 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM210	A6NLX4	147 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	CPSF4L	A6NMK7	179 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	INMT-MINDY4	F8WBC2	141 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322		M0R233	179 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	AGPAT2	O15120	278 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PLPP2	O43688	288 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	FGF2	P09038	288 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PTHLH	P12272	177 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	HPGD	P15428	266 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PSMA1	P25786	263 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SOX6	P35712	828 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	TAS2R41	P59536	307 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	TSPAN5	P62079	268 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	UBA52	P62987	128 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	MAB21L1	Q13394	359 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PRAMEF20	Q5VT98	475 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	HAGHL	Q6PII5	290 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SMARCD3	Q6STE5	483 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	LHFPL2	Q6ZUX7	228 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	LINGO2	Q7L985	606 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	NRM	Q8IXM6	262 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SPIC	Q8N5J4	248 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	RASD2	Q96D21	266 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	HAVCR1	Q96D42	359 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	C20orf24	Q9BUV8	137 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	HCAR1	Q9BXC0	346 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	MED28	Q9H204	178 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	METTL17	Q9H7H0	456 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ELOVL3	Q9HB03	270 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ADGRL4	Q9HBW9	690 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	HINT3	Q9NQE9	182 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	DIABLO	Q9NR28	239 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	UBQLN2	Q9UHD9	624 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ELF5	Q9UKW6	265 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	CMAHP	Q9Y471	501 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PTPN13	Q12923	2485 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	IGHV4-30-2	A0A087WSY4	118 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	UNC119B	A6NIH7	251 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	C17orf100	A8MU93	164 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	PYCARD-AS1	I3L0S3	204 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	PHYH	O14832	338 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ARPC5	O15511	151 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SSNA1	O43805	119 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CDC123	O75794	336 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	YIF1A	O95070	293 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	C1QB	P02746	253 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	S100A9	P06702	114 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CECR9	P0C854	216 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ANXA7	P20073	488 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	PVALB	P20472	110 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CD34	P28906	385 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SHC1	P29353	583 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF85	Q03923	595 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	EGFEM1P	Q0D2K5	195 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR1Q1	Q15612	314 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MIDN	Q504T8	468 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	KLHL12	Q53G59	568 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MRPL2	Q5T653	305 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	HES5	Q5TA89	166 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR2G6	Q5TZ20	316 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		Q6YL49	198 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAM122B	Q7Z309	247 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	HMGN2P46	Q86SG4	172 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	GID4	Q8IVV7	300 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR2T33	Q8NG76	320 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR10A7	Q8NGE5	316 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	PFN4	Q8NHR9	129 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	NSMAF	Q92636	917 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	RFK	Q969G6	155 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC25A44	Q96H78	314 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MCHR1	Q99705	422 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	KRTAP9-9	Q9BYP9	154 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	KRTAP9-4	Q9BYQ2	154 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	PATZ1	Q9HBE1	687 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CRLF2	Q9HC73	371 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CTPS2	Q9NRF8	586 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CA10	Q9NS85	328 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	LUZP4	Q9P127	313 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CEP295	Q9C0D2	2601 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A087X0M5	115 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A1B0GX30	115 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		A0A1W2PPK0	400 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		H3BN98	237 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322		H3BSH0	61 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MED6	O75586	246 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC2A10	O95528	541 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MMP9	P14780	707 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	CALCR	P30988	508 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	RPS5	P46782	204 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	STAR	P49675	285 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FABP6	P51161	128 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	RRAS2	P62070	204 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FABP9	Q0Z7S8	132 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	KRR1	Q13601	381 aa	Known RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAM76B	Q5HYJ3	339 aa		4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.54	□□□□□ -1.68
CBWD3-215	ENST00000619322	MEPCE	Q7L2J0	689 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms