RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 C5orf49A4QMS7 147 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SSNA1O43805 119 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SSX4O60224 188 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 NDUFB6O95139 128 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 FSTL3O95633 263 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 CD2P06729 351 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 EIF4EP06730 217 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ADH4P08319 380 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SPARCP09486 303 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 OR4A8P0C604 315 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ACSM4P0C7M7 580 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 NFYAP23511 347 aaPredicted RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 OTX1P32242 354 aaPredicted RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 DCTDP32321 178 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 RCVRNP35243 200 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 APLNRP35414 380 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 MPV17P39210 176 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 GDNFP39905 211 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 HTR5AP47898 357 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 PDLIM4P50479 330 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 UCP2P55851 309 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ACTBP60709 375 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 RPS11P62280 158 aaKnown RBP eCLIP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ACTG1P63261 375 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SCRN3Q0VDG4 424 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZMYND11Q15326 602 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 RBMS2Q15434 407 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SPATA46Q5T0L3 261 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 GLT8D1Q68CQ7 371 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 LAMTOR1Q6IAA8 161 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 RAB12Q6IQ22 244 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 LPCAT3Q6P1A2 487 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SSX6Q7RTT6 188 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 PRSS45Q7RTY3 260 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 DCXRQ7Z4W1 244 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 KRT77Q7Z794 578 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ELMOD2Q8IZ81 293 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZCCHC24Q8N2G6 241 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 C9orf62Q8N4C0 152 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZFP41Q8N8Y5 198 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 WFDC11Q8NEX6 87 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 GJC3Q8NFK1 279 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 OR8H1Q8NGG4 311 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 OR5L1Q8NGL2 311 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SUN5Q8TC36 379 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 LRRC20Q8TCA0 184 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 FAM168AQ92567 244 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 MRPL24Q96A35 216 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 RNF166Q96A37 237 aaPredicted RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 PERPQ96FX8 193 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 MARS2Q96GW9 593 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 DMRTB1Q96MA1 342 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 Q96MF0 132 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 DERL3Q96Q80 235 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 INTS14Q96SY0 518 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 NUDT16L1Q9BRJ7 211 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 PIMREGQ9BSJ6 248 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 REG4Q9BYZ8 158 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 DNTTIP1Q9H147 329 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 NUDT15Q9NV35 164 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 PLEK2Q9NYT0 353 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF319Q9P2F9 582 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 CKLFQ9UBR5 152 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 MTFP1Q9UDX5 166 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF222Q9UK12 451 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ZDHHC8Q9ULC8 765 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 POLR1DQ9Y2S0 133 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 STARD10Q9Y365 291 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SIRT4Q9Y6E7 314 aaPredicted RBP4.48□□□□□ -1.69
SHMT1-211ENST00000618902 METTL21EPA6NDL7 271 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 ACOD1A6NK06 481 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 M0R233 179 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 PSMD9O00233 223 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 LILRA1O75019 489 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CRYZL1O95825 349 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 IFNA2P01563 188 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 IGHV3-13P01766 116 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 APOC1P02654 83 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SLC2A1P11166 492 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF823P16415 610 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 ATF1P18846 271 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TBPP20226 339 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 ALOX5APP20292 161 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CCNOP22674 350 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 BTCP35070 178 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 RBMXP38159 391 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CDKN1AP38936 164 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 PRKXP51817 358 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CAV3P56539 151 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 KLF3P57682 345 aaPredicted RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TAGLNQ01995 201 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 ROM1Q03395 351 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 EIF2B1Q14232 305 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 HLXQ14774 488 aaPredicted RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 FCN2Q15485 313 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SNAI3Q3KNW1 292 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms