RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ZNF546Q86UE3 836 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 ZADH2Q8N4Q0 377 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 PNLDC1Q8NA58 520 aaKnown RBP15.12■□□□□ 0.01
CNOT3-209ENST00000617930 PRRT1Q99946 306 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 COMMD9Q9P000 198 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DKK4Q9UBT3 224 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 ANAPC10Q9UM13 185 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 MED12LQ86YW9 2145 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 CHD8Q9HCK8 2581 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 SVILO95425 2214 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 A0A1B0GW55 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 MSTNO14793 375 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 NGFP01138 241 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L2P0CJ85 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L3P0CJ86 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L4P0CJ87 422 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L5P0CJ88 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L6P0CJ89 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4L7P0CJ90 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 CCNOP22674 350 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 HRH1P35367 487 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 RAB1AP62820 205 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 MCEMP1Q8IX19 187 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 OR51T1Q8NGJ9 327 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 EXTL1Q92935 676 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 FBXW5Q969U6 566 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 ABHD17AQ96GS6 310 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 FGF23Q9GZV9 251 aaPredicted RBP15.12■□□□□ 0.01
CNOT3-209ENST00000617930 FN3KRPQ9HA64 309 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 GHRLQ9UBU3 117 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DUX4Q9UBX2 424 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF230Q9UIE0 474 aaPredicted RBP15.12■□□□□ 0.01
CNOT3-209ENST00000617930 C5orf49A4QMS7 147 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 TEX46H3BTG2 121 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 NRASP01111 189 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 CD79AP11912 226 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 TBR1Q16650 682 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 PLEKHN1Q494U1 663 aaPredicted RBP15.11■□□□□ 0.01
CNOT3-209ENST00000617930 PXDC1Q5TGL8 231 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 OR5M9Q8NGP3 310 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 OR1S1Q8NH92 325 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 POM121L2Q96KW2 1035 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 TM2D1Q9BX74 207 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 IFT46Q9NQC8 304 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 VSIG4Q9Y279 399 aa15.11■□□□□ 0.01
CNOT3-209ENST00000617930 A0A0D9SG52 128 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 SCGNO76038 276 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 PLATP00750 562 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 CD8AP01732 235 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 RLN2P04090 185 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 GSTP1P09211 210 aaKnown RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 PRKACBP22694 351 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 OR56B1Q8NGI3 324 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 SPSB1Q96BD6 273 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF75AQ96N20 296 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 CST11Q9H112 138 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 RGCCQ9H4X1 137 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 CLCF1Q9UBD9 225 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 KANTRA0A1W2PQU2 76 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 A8MXK9 166 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 CCSO14618 274 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 SS18L1O75177 396 aaPredicted RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 PMP2P02689 132 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 HOXD4P09016 255 aaPredicted RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 TMEM225BP0DP42 221 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 NAT1P18440 290 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 CXADRP78310 365 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 ZMYND11Q15326 602 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 FBXW9Q5XUX1 488 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 HSD17B13Q7Z5P4 300 aaPredicted RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 BVESQ8NE79 360 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 OR1K1Q8NGR3 316 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 ST8SIA2Q92186 375 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 ST8SIA4Q92187 359 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 BCL2L2Q92843 193 aaPredicted RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 REPIN1Q9BWE0 567 aaKnown RBP15.1■□□□□ 0.01
CNOT3-209ENST00000617930 PECRQ9BY49 303 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 ATPIF1Q9UII2 106 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 TP53TG5Q9Y2B4 290 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 STARD10Q9Y365 291 aa15.1■□□□□ 0.01
CNOT3-209ENST00000617930 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 OR2AT4A6NND4 320 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 LGALS8O00214 317 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 FGF2P09038 288 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 BLVRBP30043 206 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-209ENST00000617930 MICBQ29980 383 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 LRRC37A5PQ49AS3 106 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 ARHGAP21Q5T5U3 1957 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 ASCL4Q6XD76 172 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 LYG2Q86SG7 212 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 GCNT2Q8N0V5 402 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 PIGCQ92535 297 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 Q96M66 194 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 DOCK7Q96N67 2140 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 URM1Q9BTM9 101 aaKnown RBP15.09■□□□□ 0.01
CNOT3-209ENST00000617930 ELL3Q9HB65 397 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-209ENST00000617930 SLC2A8Q9NY64 477 aa15.09■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF629Q9UEG4 869 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF391Q9UJN7 358 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms