RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SLC30A7Q8NEW0 376 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 NOXO1Q8NFA2 376 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 ASB10Q8WXI3 467 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 ACOT11Q8WXI4 607 aaPredicted RBP7.26□□□□□ -1.25
GPC6-202ENST00000617456 C11orf40Q8WZ69 217 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 CREB3L1Q96BA8 519 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 RAB3CQ96E17 227 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 Q96MT0 163 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 RBP7Q96R05 134 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 FUNDC2Q9BWH2 189 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 TMPRSS13Q9BYE2 586 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 SRRQ9GZT4 340 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 PRDM13Q9H4Q3 707 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 ZNF665Q9H7R5 613 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 AASSQ9UDR5 926 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 DUSP13Q9UII6 198 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 A4GNTQ9UNA3 340 aa7.26□□□□□ -1.25
GPC6-202ENST00000617456 A6NLC8 198 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 TSTD3H0UI37 97 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 CCSO14618 274 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 ARPC5O15511 151 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 RP2O75695 350 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 IGHV3-13P01766 116 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 IFNW1P05000 195 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 MMP7P09237 267 aaPredicted RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 HKR1P10072 659 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 CCNOP22674 350 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 ZFP36P26651 326 aaKnown RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 SLC6A1P30531 599 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 PRKXP51817 358 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 UCP2P55851 309 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 LAPTM4AQ15012 233 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 TATDN3Q17R31 274 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 ALG10Q5BKT4 473 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 NHLRC3Q5JS37 347 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 DCAF12L2Q5VW00 463 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 C8orf82Q6P1X6 216 aaPredicted RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 ARL9Q6T311 187 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 LRRN1Q6UXK5 716 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 FOXL2NBQ6ZUU3 175 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 CBLL1Q75N03 491 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 WDFY1Q8IWB7 410 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 BHLHE23Q8NDY6 225 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 OR4K5Q8NGD3 323 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 SYNPRQ8TBG9 265 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 TMEM255BQ8WV15 326 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 GEMIN6Q8WXD5 167 aaKnown RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 BPIFA2Q96DR5 249 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 DIRC2Q96SL1 478 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 TMEM208Q9BTX3 173 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 NDUFAF3Q9BU61 184 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 DGCR6LQ9BY27 220 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 NKX6-2Q9C056 277 aaPredicted RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 SRA1Q9HD15 236 aaKnown RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 CYSLTR2Q9NS75 346 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 KRT84Q9NSB2 600 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 MAN2C1Q9NTJ4 1040 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 PEF1Q9UBV8 284 aaKnown RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 SMPXQ9UHP9 88 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 STUB1Q9UNE7 303 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
GPC6-202ENST00000617456 WNK1Q9H4A3 2382 aa7.25□□□□□ -1.25
GPC6-202ENST00000617456 ARHGAP32A7KAX9 2087 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 VWFP04275 2813 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 A0A1W2PPH5 198 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 C17orf100A8MU93 164 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 PRSS23O95084 383 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 LY86O95711 162 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 IFNA17P01571 189 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 ADH4P08319 380 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 CST2P09228 141 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 SPP1P10451 314 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 EEF1B2P24534 225 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 FPR2P25090 351 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 APLNRP35414 380 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 AQP2P41181 271 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 CRYBB2P43320 205 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 KCNJ3P48549 501 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 KLF3P57682 345 aaPredicted RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 RPL27P61353 136 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 CCL8P80075 99 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 SLAQ13239 276 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 EXOSC2Q13868 293 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 GK2Q14410 553 aaPredicted RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 TRAM1Q15629 374 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 PSG3Q16557 428 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 NKPD1Q17RQ9 610 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 ZNF404Q494X3 552 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 MBNL2Q5VZF2 373 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 SLC25A47Q6Q0C1 308 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 RBMS3Q6XE24 437 aaKnown RBP7.24□□□□□ -1.25
GPC6-202ENST00000617456 C17orf107Q6ZR85 190 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 MBOAT2Q6ZWT7 520 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 CYP4Z1Q86W10 505 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 SIGLECL1Q8N7X8 197 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 ZNF383Q8NA42 475 aa7.24□□□□□ -1.25
GPC6-202ENST00000617456 TAF15Q92804 592 aaKnown RBP eCLIP7.24□□□□□ -1.25
GPC6-202ENST00000617456 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms