RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 TRAPPC6BQ86SZ2 158 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 C20orf196Q8IYI0 205 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CARFQ8N187 725 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF561Q8N587 486 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 OR8B12Q8NGG6 310 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 MARCH1Q8TCQ1 289 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ABHD3Q8WU67 409 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 OR5AC2Q9NZP5 309 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 FOXJ2Q9P0K8 574 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 SEMA5BQ9P283 1151 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 LPAR3Q9UBY5 353 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 WRBO00258 174 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 OR8U8P0C7N1 319 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ZBTB25P24278 435 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 AWAT1Q58HT5 328 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 OR51F2Q8NH61 342 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 RGCCQ9H4X1 137 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 H0YIZ8 118 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 CRHP06850 196 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 PRF1P14222 555 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 CEBPGP53567 150 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 RNF212Q495C1 297 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 CLEC9AQ6UXN8 241 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 AAED1Q7RTV5 226 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 TMEM229BQ8NBD8 167 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 NOXO1Q8NFA2 376 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 TRBV5-7A0A0A0MS05 114 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF735P0CB33 412 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 HRH1P35367 487 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 Q0VFX4 171 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 FJX1Q86VR8 437 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 OR5D14Q8NGL3 314 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 OXGR1Q96P68 337 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 METTL8Q9H825 291 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 AMDHD2Q9Y303 409 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 A0A1W2PPE2 198 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 GATCO43716 136 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 OR8U9P0C7N5 309 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 PGA4P0DJD7 388 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 PGA3P0DJD8 388 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 FGF5P12034 268 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 GABRR1P24046 479 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 RGS19P49795 217 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF84P51523 738 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 DEFB109BQ30KR1 87 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 THEM4Q5T1C6 240 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 OR8U1Q8NH10 309 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 KIRREL1Q96J84 757 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 MEGF10Q96KG7 1140 aa12.69□□□□□ -0.38
SHROOM1-208ENST00000617339 CCDC187A0A096LP49 1063 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 ZIC3O60481 467 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 SFTPBP07988 381 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 GPX4P36969 197 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 CAV2P51636 162 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 DNM1P46Q6ZS02 220 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 GGACTQ9BVM4 153 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 C7orf77A4D0Y5 90 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 PINLYPA6NC86 204 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF616Q08AN1 781 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 TEX30Q5JUR7 227 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 Q6ZRG5 221 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF383Q8NA42 475 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 PIGQQ9BRB3 760 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 SPACA1Q9HBV2 294 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 CYTL1Q9NRR1 136 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 SOCS1O15524 211 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 NDUFA6P56556 154 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 SLC35A1P78382 337 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 IL34Q6ZMJ4 242 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 C1QL2Q7Z5L3 287 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 RNF133Q8WVZ7 376 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 IMMP1LQ96LU5 166 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 TCEAL7Q9BRU2 100 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 EIF5A2Q9GZV4 153 aaKnown RBP12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 GPR173Q9NS66 373 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
SHROOM1-208ENST00000617339 H7C1Q1 480 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 NME2P1O60361 137 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 HOXB5P09067 269 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 FBP1P09467 338 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 SELLP14151 372 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 NPY4RP50391 375 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF774Q6NX45 483 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 SLC30A7Q8NEW0 376 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 CDC6Q99741 560 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 PRO1933Q9H354 126 aa12.67□□□□□ -0.38
SHROOM1-208ENST00000617339 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms