RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 SRP9P49458 86 aaKnown RBP12.83□□□□□ -0.36
CBWD1-225ENST00000616944 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.36
CBWD1-225ENST00000616944 GPR176Q14439 515 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 RSU1Q15404 277 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 ZNF79Q15937 498 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 ZCCHC24Q8N2G6 241 aaKnown RBP12.83□□□□□ -0.36
CBWD1-225ENST00000616944 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 CEP19Q96LK0 163 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 TM2D1Q9BX74 207 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 TMEM59Q9BXS4 323 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 MS4A5Q9H3V2 200 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 BANF2Q9H503 90 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 CBLN4Q9NTU7 201 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
CBWD1-225ENST00000616944 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 CLDN25C9JDP6 229 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 RAB27BO00194 218 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 MPIG6BO95866 241 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 SOD3P08294 240 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 CDK2P24941 298 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 CFHR2P36980 270 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 PPOXP50336 477 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 TNFAIP6P98066 277 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 ZNF45Q02386 682 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 METAP1DQ6UB28 335 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 FAM89BQ8N5H3 189 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 MRPS24Q96EL2 167 aaKnown RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 Q96M66 194 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 NRIP2Q9BQI9 281 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 NICN1Q9BSH3 213 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 ELL3Q9HB65 397 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 RHOFQ9HBH0 211 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 HES4Q9HCC6 221 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 FAIMQ9NVQ4 179 aa12.82□□□□□ -0.36
CBWD1-225ENST00000616944 RBFOX1Q9NWB1 397 aaKnown RBP12.82□□□□□ -0.36
CBWD1-225ENST00000616944 SPG11Q96JI7 2443 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 FOXI3A8MTJ6 420 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-225ENST00000616944 TRAPPC2LH3BP13 241 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 HTR3BO95264 441 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 CYB5AP00167 134 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 GTF2F2P13984 249 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 TNFSF4P23510 183 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 SNRPD2P62316 118 aaKnown RBP12.81□□□□□ -0.36
CBWD1-225ENST00000616944 TESK1Q15569 626 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 NHLRC3Q5JS37 347 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 OR51T1Q8NGJ9 327 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 S100A16Q96FQ6 103 aaKnown RBP12.81□□□□□ -0.36
CBWD1-225ENST00000616944 ZNF488Q96MN9 340 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 GCM1Q9NP62 436 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 UFSP2Q9NUQ7 469 aa12.81□□□□□ -0.36
CBWD1-225ENST00000616944 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 A6NJ64 397 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 XRCC3O43542 346 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 CSTBP04080 98 aaKnown RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 PMELP40967 661 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 MNDAP41218 407 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 FGF12P61328 243 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 CCL8P80075 99 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 TLE4Q04727 773 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 PCGF3Q3KNV8 242 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 AGAP6Q5VW22 663 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 USF3Q68DE3 2245 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 SP5Q6BEB4 398 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 Q8IYB0 196 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 OSR2Q8N2R0 312 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 Q8TCH9 128 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 ERGIC1Q969X5 290 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 NUDT16L1Q9BRJ7 211 aaKnown RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 TRAF4Q9BUZ4 470 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 SELENOIQ9C0D9 397 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 WDR12Q9GZL7 423 aaKnown RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 FBXO9Q9UK97 447 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 METTL21EPA6NDL7 271 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 FABP12A6NFH5 140 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 A6NLC8 198 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 AKR7A2O43488 359 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 TALDO1P37837 337 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 NR4A2P43354 598 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 PTH2RP49190 550 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
CBWD1-225ENST00000616944 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 BATF2Q8N1L9 274 aa12.8□□□□□ -0.36
CBWD1-225ENST00000616944 DTX3Q8N9I9 347 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms