RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RAB39BQ96DA2 213 aa13.61□□□□□ -0.23
GPN1-212ENST00000616939 MSI2Q96DH6 328 aaKnown RBP13.61□□□□□ -0.23
GPN1-212ENST00000616939 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
GPN1-212ENST00000616939 LYZL4Q96KX0 146 aa13.61□□□□□ -0.23
GPN1-212ENST00000616939 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
GPN1-212ENST00000616939 IGLV3-32A0A0A0MS00 114 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 H3BQ15 152 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 HSD17B6O14756 317 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 MSTNO14793 375 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 C1QL1O75973 258 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 TMEM225BP0DP42 221 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 NR2C1P13056 603 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 RBP2P50120 134 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 NDUFA6P56556 154 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
GPN1-212ENST00000616939 SMAD4Q13485 552 aaKnown RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 ELOBQ15370 118 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 C17orf82Q86X59 251 aaPredicted RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 D2HGDHQ8N465 521 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 HSD17B11Q8NBQ5 300 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 OR10G4Q8NGN3 311 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 PRDM13Q9H4Q3 707 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 PLEKHJ1Q9NW61 149 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 TCRBV21S2A2A0A5A6 115 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 B4DEV8 164 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 CDS2O95674 445 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 KLK3P07288 261 aaPredicted RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 ANOS1P23352 680 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 RNF4P78317 190 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 SRPXP78539 464 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 DPPA3Q6W0C5 159 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 REC114Q7Z4M0 266 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 C6orf201Q7Z4U5 140 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 CCDC71LQ8N9Z2 235 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 GTF3AQ92664 365 aaKnown RBP13.6□□□□□ -0.23
GPN1-212ENST00000616939 NELFAQ9H3P2 528 aa13.6□□□□□ -0.23
GPN1-212ENST00000616939 LOC102725191A0A1B0GVB3 256 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 RER1O15258 196 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 XRCC2O43543 280 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 FCGR2AP12318 317 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 MYOGP15173 224 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 CSNK1A1P48729 337 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 UBE2KP61086 200 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 MYBPHQ13203 477 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 GNMTQ14749 295 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 UBE2V2Q15819 145 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 ZNF674Q2M3X9 581 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 CLEC9AQ6UXN8 241 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 FOXL2NBQ6ZUU3 175 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 LYZL2Q7Z4W2 148 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 OR14L1PQ8NHC6 308 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 Q8WTZ3 238 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 CPNE4Q96A23 557 aaPredicted RBP13.59□□□□□ -0.23
GPN1-212ENST00000616939 TVP23CQ96ET8 276 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 KLHDC7BQ96G42 594 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 SPSB2Q99619 263 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 WDR77Q9BQA1 342 aaPredicted RBP13.59□□□□□ -0.23
GPN1-212ENST00000616939 VN1R1Q9GZP7 353 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 LIME1Q9H400 295 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 SDHAF3Q9NRP4 125 aa13.59□□□□□ -0.23
GPN1-212ENST00000616939 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
GPN1-212ENST00000616939 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
GPN1-212ENST00000616939 ZNF726A6NNF4 738 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 ZNF732B4DXR9 585 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 EFNA2O43921 213 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 RAMP1O60894 148 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 DIRAS3O95661 229 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 HEXBP07686 556 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 CEACAM1P13688 526 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.24
GPN1-212ENST00000616939 GLIPR1P48060 266 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 NHLH2Q02577 135 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 HIST2H3PS2Q5TEC6 136 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 OR5D18Q8NGL1 313 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 M1APQ8TC57 530 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 SGK3Q96BR1 496 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 MOB3AQ96BX8 217 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 RBMXL1Q96E39 390 aaKnown RBP13.58□□□□□ -0.24
GPN1-212ENST00000616939 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.24
GPN1-212ENST00000616939 RARRES2Q99969 163 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 NUDT22Q9BRQ3 303 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
GPN1-212ENST00000616939 FAM230AA0A1W2PPH8 454 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 ZNF724A8MTY0 619 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HSPA12AO43301 675 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 SCAF4O95104 1147 aaKnown RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 PTBP3O95758 552 aaKnown RBP13.57□□□□□ -0.24
GPN1-212ENST00000616939 HBE1P02100 147 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 MMP9P14780 707 aa13.57□□□□□ -0.24
GPN1-212ENST00000616939 PAX1P15863 534 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms