RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR7C1	O76099	320 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	FUT3	P21217	361 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	S100G	P29377	79 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	SLC6A8	P48029	635 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	PAX5	Q02548	391 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	TNFRSF9	Q07011	255 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	GKN2	Q86XP6	184 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	GPHA2	Q96T91	129 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	HIST1H2BL	Q99880	126 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	SHISA8	B8ZZ34	492 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	CYR61	O00622	381 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	AQP7	O14520	342 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF121	P58317	390 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	DYRK2	Q92630	601 aa		13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-223	ENST00000616179	HSPB2	A8KAH6	182 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	PPIH	O43447	177 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	FAH	P16930	419 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	BMP5	P22003	454 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	HSPB2	Q16082	182 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR52M1	Q8NGK5	317 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	CCDC74B	Q96LY2	380 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	METTL9	Q9H1A3	318 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	STARD10	Q9Y365	291 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	KIAA0100	Q14667	2235 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	DAP3	P51398	398 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	FHL1	Q13642	323 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	COTL1	Q14019	142 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF141	Q15928	474 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	PLAC9	Q5JTB6	97 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	RNF144B	Q7Z419	303 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	MYPOP	Q86VE0	399 aa	Predicted RBP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	NOL4L	Q96MY1	436 aa	Predicted RBP	13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	VSTM2L	Q96N03	204 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	GNRHR2	Q96P88	292 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	SPIN2A	Q99865	258 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	SPIN2B	Q9BPZ2	258 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	SLC39A9	Q9NUM3	307 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	PAM16	Q9Y3D7	125 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	CTSB	P07858	339 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	CT45A8	P0DMV1	189 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	CT45A9	P0DMV2	189 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	CT45A2	Q5DJT8	189 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR13D1	Q8NGV5	346 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	MS4A10	Q96PG2	267 aa		13.81	□□□□□ -0.2
SYNRG-223	ENST00000616179	LOC390937	A0A1W2PQ73	354 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	FAM221B	A6H8Z2	402 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	PDGFB	P01127	241 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	DBH	P09172	617 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	HNF1A	P20823	631 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	GNG10	P50151	68 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF117	Q03924	483 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ARL6IP1	Q15041	203 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ISX	Q2M1V0	245 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	PRR18	Q8N4B5	295 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	IL22RA1	Q8N6P7	574 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR11L1	Q8NGX0	322 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	NT5C	Q8TCD5	201 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	TMEM234	Q8WY98	164 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	CYYR1	Q96J86	154 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	FAM103A1	Q9BTL3	118 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	NDUFAF3	Q9BU61	184 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	RBM24	Q9BX46	236 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	VWA8	A3KMH1	1905 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	RER1	O15258	196 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	NUTF2	P61970	127 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	HHEX	Q03014	270 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	SGCB	Q16585	318 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	FHL5	Q5TD97	284 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ANKRD33	Q7Z3H0	272 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF321P	Q8N8H1	164 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	NECAP2	Q9NVZ3	263 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	SPRY1	O43609	319 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ASAH2B	P0C7U1	165 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	PLAUR	Q03405	335 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF658B	Q4V348	819 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF664	Q8N3J9	261 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	TSLP	Q969D9	159 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	SDSL	Q96GA7	329 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	SGCZ	Q96LD1	299 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	MRPL37	Q9BZE1	423 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	EGLN1	Q9GZT9	426 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	FKBP11	Q9NYL4	201 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	KLHL13	Q9P2N7	655 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	DOCK9	Q9BZ29	2069 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	TLX3	O43711	291 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	LILRB3	O75022	631 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	RAB4A	P20338	218 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	CCNO	P22674	350 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	DYNLT3	P51808	116 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	SUPT4H1	P63272	117 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	GABRE	P78334	506 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	EGR4	Q05215	589 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	KISS1	Q15726	138 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	LBH	Q53QV2	105 aa	Predicted RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms