RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ISLRO14498 428 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 SOCS7O14512 581 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 PPM1DO15297 605 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 CLDN18P56856 261 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 OR1F12Q8NHA8 337 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ITLN2Q8WWU7 325 aaPredicted RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 L3HYPDHQ96EM0 354 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 DNAJC15Q9Y5T4 150 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ALG1L2C9J202 215 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 CCSO14618 274 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 B3GALT4O96024 378 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 PSMB1P20618 241 aaKnown RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 COL8A1P27658 744 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 TSPOP30536 169 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 SDHAP31040 664 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 GMPRP36959 345 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 CAPZBP47756 277 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 JUNBP17275 347 aaPredicted RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
TCF4-248ENST00000616053 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 TMEM215Q68D42 235 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ZBTB34Q8NCN2 500 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 OR4C16Q8NGL9 310 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ARRDC2Q8TBH0 407 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 ZPLD1Q8TCW7 415 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 TBC1D29Q9UFV1 150 aa11.33□□□□□ -0.6
TCF4-248ENST00000616053 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 DHHO43323 396 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 HKR1P10072 659 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ZNF121P58317 390 aaPredicted RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 RPUSD3Q6P087 351 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 MRGPRDQ8TDS7 321 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 VSIG10L2P0DP72 767 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 MVB12AQ96EY5 273 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 MRGPRX1Q96LB2 322 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 CDX2Q99626 313 aaPredicted RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 CITED2Q99967 270 aaPredicted RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 LRRC75BQ2VPJ9 315 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 SIGLEC10Q96LC7 697 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 NSG2Q9Y328 171 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 A0A0A6YYJ9 748 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ZC3H12DA2A288 527 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ARRB2P32121 409 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 SLC37A1P57057 533 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 TWIST1Q15672 202 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 TMEM128Q5BJH2 165 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 C6orf201Q7Z4U5 140 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 MOGAT3Q86VF5 341 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 OR4S1Q8NGB4 309 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 RTN4IP1Q8WWV3 396 aaPredicted RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 ADTRPQ96IZ2 230 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 CEP152O94986 1710 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 MTCL1Q9Y4B5 1905 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 TMSB15BA0A087X1C1 80 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 NPPBP16860 134 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 RPS25P62851 125 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 MRPS11P82912 194 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ZNF429Q86V71 674 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 PBOV1Q9GZY1 135 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 NUDT16L1Q9BRJ7 211 aaKnown RBP11.32□□□□□ -0.6
TCF4-248ENST00000616053 SEC11CQ9BY50 192 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 UQCC1Q9NVA1 299 aa11.32□□□□□ -0.6
TCF4-248ENST00000616053 DUOX1Q9NRD9 1551 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 P01737 135 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 OR51S1Q8NGJ8 323 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 GLRX2Q9NS18 164 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 A0A1W2PNV4 684 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 LALBAP00709 142 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
TCF4-248ENST00000616053 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 PGPA6NDG6 321 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 INHBBP09529 407 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 GPNMBQ14956 572 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 SLC48A1Q6P1K1 146 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms