RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.8■□□□□ 0.28
SPAST-203ENST00000615843 MOGAT1Q96PD6 335 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 NRIP2Q9BQI9 281 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 ZNF835Q9Y2P0 537 aa16.8■□□□□ 0.28
SPAST-203ENST00000615843 CER1O95813 267 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 FAM3AP98173 230 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 ZNF764Q96H86 408 aaPredicted RBP16.79■□□□□ 0.28
SPAST-203ENST00000615843 GEMIN2O14893 280 aaKnown RBP16.79■□□□□ 0.28
SPAST-203ENST00000615843 GPM6AP51674 278 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 LSM11P83369 360 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPAST-203ENST00000615843 NSUN5P2Q63ZY6 315 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 OR1F12Q8NHA8 337 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 KLRC4-KLRK1H3BQV0 150 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 COX7A2P2O60397 106 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 CNIH1O95406 144 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 AMTP48728 403 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 DYNLT3P51808 116 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 MOB1BQ7L9L4 216 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 FKBP11Q9NYL4 201 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 CFDP00746 253 aaPredicted RBP16.79■□□□□ 0.28
SPAST-203ENST00000615843 RPLP1P05386 114 aaKnown RBP16.79■□□□□ 0.28
SPAST-203ENST00000615843 CACNG5Q9UF02 275 aa16.79■□□□□ 0.28
SPAST-203ENST00000615843 TNFSF11O14788 317 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 SOX15O60248 233 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 YIF1AO95070 293 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 GYPAP02724 150 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 PARM1Q6UWI2 310 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 TSEN54Q7Z6J9 526 aaKnown RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 NPEPL1Q8NDH3 523 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 MARVELD3Q96A59 401 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 PRSS50Q9UI38 385 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 PITPNC1Q9UKF7 332 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 TOX3O15405 576 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 MBPP02686 304 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 UBE2V2Q15819 145 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 FA2HQ7L5A8 372 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR10G4Q8NGN3 311 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR10G9Q8NGN4 311 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR10G7Q8NGN6 311 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR5H15A6NDH6 313 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR5H1A6NKK0 313 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 SIGLEC5O15389 551 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 ANKRD34CP0C6C1 535 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 CCR2P41597 374 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 GFERP55789 205 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 SIGLEC14Q08ET2 396 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 MYBPHQ13203 477 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 GPA33Q99795 319 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 PECRQ9BY49 303 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 ALX4Q9H161 411 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 TRAV8-7A0A075B6U6 113 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 OR4C45A6NMZ5 311 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 H3BMH7 237 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 CRISP2P16562 243 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 CHRNB4P30926 498 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 CDC34P49427 236 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 DCAF12L2Q5VW00 463 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 ZNF660Q6AZW8 331 aaPredicted RBP16.78■□□□□ 0.28
SPAST-203ENST00000615843 NHLRC2Q8NBF2 726 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 IFI44Q8TCB0 444 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 DYRK2Q92630 601 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
SPAST-203ENST00000615843 LRRC30A6NM36 301 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 WISP3O95389 354 aaPredicted RBP16.77■□□□□ 0.28
SPAST-203ENST00000615843 TMIGD3P0DMS9 266 aaPredicted RBP16.77■□□□□ 0.28
SPAST-203ENST00000615843 ZNF141Q15928 474 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 TIPARPQ7Z3E1 657 aaKnown RBP16.77■□□□□ 0.28
SPAST-203ENST00000615843 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 VSIG10L2P0DP72 767 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 AGFG1P52594 562 aaKnown RBP16.77■□□□□ 0.28
SPAST-203ENST00000615843 CEBPEQ15744 281 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 KCNE4Q8WWG9 221 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 ALG14Q96F25 216 aa16.77■□□□□ 0.28
SPAST-203ENST00000615843 ALKBH3Q96Q83 286 aaPredicted RBP16.77■□□□□ 0.28
SPAST-203ENST00000615843 SHISA8B8ZZ34 492 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 CTSVO60911 334 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 RPEL1Q2QD12 228 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 ADAD2Q8NCV1 583 aaKnown RBP16.77■□□□□ 0.27
SPAST-203ENST00000615843 M1APQ8TC57 530 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 ANAPC16Q96DE5 110 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 MPZL1O95297 269 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 CLEC3BP05452 202 aa16.77■□□□□ 0.27
SPAST-203ENST00000615843 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.27
SPAST-203ENST00000615843 PDCD6O75340 191 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 GNG4P50150 75 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 RGS7BPQ6MZT1 257 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 LILRB1Q8NHL6 650 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 ATP5SQ99766 215 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 DECR2Q9NUI1 292 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 IL17BQ9UHF5 180 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 SIRT4Q9Y6E7 314 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 WDR73Q6P4I2 378 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 HLA-CQ95604 372 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 FLRT3Q9NZU0 649 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 ZFC3H1O60293 1989 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms