RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 IGKV1-12A0A0C4DH73 117 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 A6NHS1 94 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 SRRM5B3KS81 715 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 RP2O75695 350 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 KDM4BO94953 1096 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 NXPH2O95156 264 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 CYB5R3P00387 301 aaPredicted RBP12.37□□□□□ -0.43
CD48-203ENST00000613788 IGKV1D-12P01611 117 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 CSF3P09919 207 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 ARSBP15848 533 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 GLRA1P23415 457 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 PDLIM4P50479 330 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 BMXP51813 675 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 DSCR9P59020 149 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 CARTPTQ16568 116 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 BOLLQ8N9W6 283 aaKnown RBP12.37□□□□□ -0.43
CD48-203ENST00000613788 SLC25A28Q96A46 364 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 IL36GQ9NZH8 169 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 DAPK2Q9UIK4 370 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 TACC2O95359 2948 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 CACNA1DQ01668 2161 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 PPIAL4EA0A075B759 164 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 NBPF19A0A087WUL8 3843 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 BPNT1O95861 308 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 PPIAL4FP0DN26 164 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 BCL3P20749 454 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 SOX6P35712 828 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 ERVK11-1P61568 191 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 HNRNPA0Q13151 305 aaKnown RBP12.37□□□□□ -0.43
CD48-203ENST00000613788 SLC22A6Q4U2R8 563 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 FIP1L1Q6UN15 594 aaKnown RBP12.37□□□□□ -0.43
CD48-203ENST00000613788 CLEC2AQ6UVW9 174 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 ZNF525Q8N782 197 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 RAB1CQ92928 201 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 FAM3DQ96BQ1 224 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 ZNF488Q96MN9 340 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 CST11Q9H112 138 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
CD48-203ENST00000613788 USF3Q68DE3 2245 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 NDUFS8O00217 210 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
CD48-203ENST00000613788 HTR3BO95264 441 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 FSTL3O95633 263 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
CD48-203ENST00000613788 NPBWR2P48146 333 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 CLDN12P56749 244 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 GMFBP60983 142 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 P2RY14Q15391 338 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 DGUOKQ16854 277 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 SMIM21Q3B7S5 101 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 C2orf76Q3KRA6 126 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 ELP2Q6IA86 826 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 FAM90A1Q86YD7 464 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 FAM58AQ8N1B3 248 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 Q8NFD4 153 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 OR51D1Q8NGF3 324 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 EMG1Q92979 244 aaKnown RBP12.36□□□□□ -0.43
CD48-203ENST00000613788 MRPS24Q96EL2 167 aaKnown RBP12.36□□□□□ -0.43
CD48-203ENST00000613788 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 HES4Q9HCC6 221 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 DCAF16Q9NXF7 216 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 DNAJB11Q9UBS4 358 aa12.36□□□□□ -0.43
CD48-203ENST00000613788 APCP25054 2843 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 SPG11Q96JI7 2443 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 LGALS8O00214 317 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 WNT9BO14905 357 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 SFTPBP07988 381 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 CALCBP10092 127 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 GTF2F2P13984 249 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 MUC1P15941 1255 aaPredicted RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 SERPINA2P20848 420 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 GIFP27352 417 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 GPR6P46095 362 aaPredicted RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 SCAND1P57086 179 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 KCNJ8Q15842 424 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 MICBQ29980 383 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 ACP7Q6ZNF0 438 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 FAM168AQ92567 244 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 AP3S1Q92572 193 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 C1orf147Q96MC9 270 aaPredicted RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 WDR13Q9H1Z4 485 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 RBFOX1Q9NWB1 397 aaKnown RBP12.35□□□□□ -0.43
CD48-203ENST00000613788 ABRACLQ9P1F3 81 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 UNC79Q9P2D8 2635 aa12.35□□□□□ -0.43
CD48-203ENST00000613788 DYSFO75923 2080 aa12.34□□□□□ -0.43
CD48-203ENST00000613788 OOEPA6NGQ2 149 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms