RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FAM27BQ5VT28 67 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 UNQ6126/PRO20091Q6UXV3 157 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 C20orf196Q8IYI0 205 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 BPIFCQ8NFQ6 507 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 OR52H1Q8NGJ2 320 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 SPTSSAQ969W0 71 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 ST6GALNAC5Q9BVH7 336 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 HES7Q9BYE0 225 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 CYTL1Q9NRR1 136 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 EHFQ9NZC4 300 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 PIGLQ9Y2B2 252 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 TNFSF11O14788 317 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 RRP8O43159 456 aaKnown RBP12.8□□□□□ -0.36
CDH1-213ENST00000612417 FCGR2AP12318 317 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 SERPINA2P20848 420 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 ECI1P42126 302 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 RRADP55042 308 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 IL15RAQ13261 267 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 PLEKHN1Q494U1 663 aaPredicted RBP12.8□□□□□ -0.36
CDH1-213ENST00000612417 WIPI1Q5MNZ9 446 aaPredicted RBP12.8□□□□□ -0.36
CDH1-213ENST00000612417 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 BAP18Q8IXM2 172 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 LRRC18Q8N456 261 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 OR2M7Q8NG81 312 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 NPRL2Q8WTW4 380 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 AQP10Q96PS8 301 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 SF3B5Q9BWJ5 86 aaKnown RBP12.8□□□□□ -0.36
CDH1-213ENST00000612417 RBM24Q9BX46 236 aaKnown RBP12.8□□□□□ -0.36
CDH1-213ENST00000612417 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
CDH1-213ENST00000612417 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 MPTX1A8MV57 137 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 ADAP1O75689 374 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 PET100P0DJ07 73 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 PI3P19957 117 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 CRYGSP22914 178 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 B3GALT5-AS1P59052 145 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 OR1S2Q8NGQ3 325 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 C2orf50Q96LR7 162 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 Q96M66 194 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 S100A13Q99584 98 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 PLEK2Q9NYT0 353 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 A0A0J9YW62 118 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 NUDT19A8MXV4 375 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 SDCBPO00560 298 aaPredicted RBP12.79□□□□□ -0.36
CDH1-213ENST00000612417 KCNAB3O43448 404 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 HTR3BO95264 441 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 SSTP61278 116 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 FOXO1Q12778 655 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 CHRFAM7AQ494W8 412 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 DMRTC1Q5HYR2 192 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 IGF2-ASQ6U949 168 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 POC1AQ8NBT0 407 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 KCNE4Q8WWG9 221 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 SPSB1Q96BD6 273 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 FBXO17Q96EF6 278 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
CDH1-213ENST00000612417 KLF2Q9Y5W3 355 aaPredicted RBP12.79□□□□□ -0.36
CDH1-213ENST00000612417 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 DBHP09172 617 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 CD79AP11912 226 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 GLRA1P23415 457 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 RAB35Q15286 201 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 GPR137CQ8N3F9 429 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 SGK3Q96BR1 496 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 SLC6A15Q9H2J7 730 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
CDH1-213ENST00000612417 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.36
CDH1-213ENST00000612417 RAC3P60763 192 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 PLGLB1Q02325 96 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 SNAI3Q3KNW1 292 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 PIGTQ969N2 578 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 CPNE2Q96FN4 548 aaPredicted RBP12.77□□□□□ -0.36
CDH1-213ENST00000612417 OR10C1Q96KK4 312 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.36
CDH1-213ENST00000612417 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 ASF1BQ9NVP2 202 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.36
CDH1-213ENST00000612417 EDARQ9UNE0 448 aa12.77□□□□□ -0.36
CDH1-213ENST00000612417 MSGN1A6NI15 193 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 FAM166BA8MTA8 275 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 PRSS44E7EML9 344 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 SYNGR3O43761 229 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 CSTBP04080 98 aaKnown RBP12.77□□□□□ -0.37
CDH1-213ENST00000612417 CST2P09228 141 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 CCL11P51671 97 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 CARD18P57730 90 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 ARG2P78540 354 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 SEMA6DQ8NFY4 1073 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 METTL8Q9H825 291 aaKnown RBP12.77□□□□□ -0.37
CDH1-213ENST00000612417 HSF4Q9ULV5 492 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.37
CDH1-213ENST00000612417 MRPS18CQ9Y3D5 142 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms