RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 WDR82Q6UXN9 313 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 OR2W3Q7Z3T1 314 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 CDH24Q86UP0 819 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 MCFD2Q8NI22 146 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 S100A13Q99584 98 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 SAP30LQ9HAJ7 183 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 ETV7Q9Y603 341 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
CLTCL1-207ENST00000611723 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 A0A0B4J203 849 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 A6NLC8 198 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 PAHP00439 452 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 LHBP01229 141 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 HPXP02790 462 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 VSIG8P0DPA2 414 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 SNRPBP14678 240 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 RAB6AP20340 208 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 BMXP51813 675 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 ZNF826PQ6ZT77 177 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 MOGAT3Q86VF5 341 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 Q8IYB0 196 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 POC1AQ8NBT0 407 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 KCNG3Q8TAE7 436 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 MRPS24Q96EL2 167 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 LURAP1Q96LR2 239 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 SMURF1Q9HCE7 757 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 UFSP2Q9NUQ7 469 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 RAB22AQ9UL26 194 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 PPP1R3CQ9UQK1 317 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 CCDC168Q8NDH2 2452 aa13.47□□□□□ -0.25
CLTCL1-207ENST00000611723 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 HIVEP1P15822 2718 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 ITPR3Q14573 2671 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 IGHV3-64DA0A0J9YX35 117 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 TMEM272A0A1B0GTI8 110 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 TPD52L2O43399 206 aaKnown RBP13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 PLATP00750 562 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 SFTPBP07988 381 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 RSU1Q15404 277 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 OR5H6Q8NGV6 325 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 OR11L1Q8NGX0 322 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 LGALS14Q8TCE9 139 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 SLAMF9Q96A28 289 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 CEP19Q96LK0 163 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 CCL19Q99731 98 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 CST11Q9H112 138 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 RASL12Q9NYN1 266 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 RNF7Q9UBF6 113 aa13.46□□□□□ -0.25
CLTCL1-207ENST00000611723 DYSFO75923 2080 aa13.46□□□□□ -0.26
CLTCL1-207ENST00000611723 SRRM5B3KS81 715 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 CTDSP2O14595 271 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 F12P00748 615 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 PAX1P15863 534 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 BCL3P20749 454 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 NPBWR2P48146 333 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 UNC119Q13432 240 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 SLC22A6Q4U2R8 563 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 NHLRC3Q5JS37 347 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 LINC00299Q6ZSB3 139 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 OR51T1Q8NGJ9 327 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 HPS1Q92902 700 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 ABCG5Q9H222 651 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 CXorf56Q9H5V9 222 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 ELL3Q9HB65 397 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 ZNF701Q9NV72 531 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
CLTCL1-207ENST00000611723 DCHS2Q6V1P9 2916 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 IGHV1-69-2A0A0G2JMI3 117 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 LRRC30A6NM36 301 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 F8VVB4 439 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 F8VWA3 439 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 AKR7A2O43488 359 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 CDC14BO60729 498 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 CLPXO76031 633 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 HTR3BO95264 441 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 CSTBP04080 98 aaKnown RBP13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 GTF2F2P13984 249 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 CDKN1AP38936 164 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 EFNA4P52798 201 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 FGF12P61328 243 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 FAM189A2Q15884 450 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 OR10K2Q6IF99 312 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 FAM90A1Q86YD7 464 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 FAM58AQ8N1B3 248 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 OSR2Q8N2R0 312 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 GCSAMQ8N6F7 178 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 TMEM104Q8NE00 496 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 OR10K1Q8NGX5 313 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 LRRC29Q8WV35 223 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 RDH5Q92781 318 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 SEBOXQ9HB31 216 aaPredicted RBP13.44□□□□□ -0.26
CLTCL1-207ENST00000611723 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms