RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 NLKQ9UBE8 527 aa15.83■□□□□ 0.12
SGMS1-208ENST00000608287 SLC7A11Q9UPY5 501 aa15.83■□□□□ 0.12
SGMS1-208ENST00000608287 KMT2CQ8NEZ4 4911 aaKnown RBP15.82■□□□□ 0.12
SGMS1-208ENST00000608287 FAM230AA0A1W2PPH8 454 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 PQLC2LA1A4F0 135 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 J3QT63 122 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 NDUFB3O43676 98 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 SYNGR1O43759 233 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 CLIC3O95833 236 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 ECDO95905 644 aaPredicted RBP15.82■□□□□ 0.12
SGMS1-208ENST00000608287 IGHA1P01876 353 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 TFF1P04155 84 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 LIPFP07098 398 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 AMY2BP19961 511 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 NANOS3P60323 173 aaKnown RBP15.82■□□□□ 0.12
SGMS1-208ENST00000608287 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 SMN1Q16637 294 aaKnown RBP15.82■□□□□ 0.12
SGMS1-208ENST00000608287 KLHL22Q53GT1 634 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 VAX1Q5SQQ9 334 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF691Q5VV52 312 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 TTC23Q5W5X9 447 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 FGFRL1Q8N441 504 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 OR52I1Q8NGK6 324 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 NPRL2Q8WTW4 380 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 PELI1Q96FA3 418 aa15.82■□□□□ 0.12
SGMS1-208ENST00000608287 OR2AT4A6NND4 320 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 WBP4O75554 376 aaKnown RBP15.81■□□□□ 0.12
SGMS1-208ENST00000608287 GATBO75879 557 aaKnown RBP15.81■□□□□ 0.12
SGMS1-208ENST00000608287 SERPINA3P01011 423 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 GABRA2P47869 451 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 TGM4P49221 684 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 LOXL3P58215 753 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 LRRC10Q5BKY1 277 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 ATPAF1Q5TC12 328 aaPredicted RBP15.81■□□□□ 0.12
SGMS1-208ENST00000608287 FDX2Q6P4F2 183 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 BRD3OSQ6XYD6 125 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 DHRSXQ8N5I4 330 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 POC1AQ8NBT0 407 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 ANGPTL6Q8NI99 470 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 MED30Q96HR3 178 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF488Q96MN9 340 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 PCGF1Q9BSM1 259 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 DNTTIP1Q9H147 329 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 ISG20L2Q9H9L3 353 aaKnown RBP15.81■□□□□ 0.12
SGMS1-208ENST00000608287 INPP5EQ9NRR6 644 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 MRPS18AQ9NVS2 196 aaKnown RBP15.81■□□□□ 0.12
SGMS1-208ENST00000608287 ERVK13-1Q9NX77 482 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 POLDIP2Q9Y2S7 368 aa15.81■□□□□ 0.12
SGMS1-208ENST00000608287 TET2Q6N021 2002 aaPredicted RBP15.8■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF879B4DU55 563 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 MELTFP08582 738 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 SELLP14151 372 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 CCR9P51686 369 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 KRTAP10-3P60369 221 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 ALKBH1Q13686 389 aaKnown RBP15.8■□□□□ 0.12
SGMS1-208ENST00000608287 UBE2V2Q15819 145 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 C11orf91Q3C1V1 193 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 GDPGP1Q6ZNW5 385 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF788Q6ZQV5 615 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 ANGPTL5Q86XS5 388 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 SETD9Q8NE22 299 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 CNIH3Q8TBE1 160 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 C10orf35Q96D05 121 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 GAFA1Q96PS6 74 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 CHST5Q9GZS9 411 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 RASL12Q9NYN1 266 aa15.8■□□□□ 0.12
SGMS1-208ENST00000608287 RPUSD1Q9UJJ7 312 aaKnown RBP15.8■□□□□ 0.12
SGMS1-208ENST00000608287 G3V4G9 280 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 GPR37O15354 613 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 TOX4O94842 621 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 OPN1MWP04001 364 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 ISG15P05161 165 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 PGA5P0DJD9 388 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 OPN1MW2P0DN77 364 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 OPN1MW3P0DN78 364 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 PSG2P11465 335 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF20P17024 532 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 GABPB1Q06547 395 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-208ENST00000608287 SMIM21Q3B7S5 101 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 OGFRL1Q5TC84 451 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-208ENST00000608287 SAMD5Q5TGI4 173 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 METTL11BQ5VVY1 283 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 ACP7Q6ZNF0 438 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 CALHM1Q8IU99 346 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 BATF2Q8N1L9 274 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 ZNF676Q8N7Q3 588 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 PP6455Q8WZ26 134 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 H1FXQ92522 213 aaKnown RBP15.79■□□□□ 0.12
SGMS1-208ENST00000608287 FGGYQ96C11 551 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 ADAT3Q96EY9 351 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-208ENST00000608287 HHLA2Q9UM44 414 aa15.79■□□□□ 0.12
SGMS1-208ENST00000608287 SOX21Q9Y651 276 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-208ENST00000608287 IGKV1D-17A0A075B6S4 117 aa15.78■□□□□ 0.12
SGMS1-208ENST00000608287 OR4C45A6NMZ5 311 aa15.78■□□□□ 0.12
SGMS1-208ENST00000608287 CASQ2O14958 399 aaPredicted RBP15.78■□□□□ 0.12
SGMS1-208ENST00000608287 SIGLEC5O15389 551 aa15.78■□□□□ 0.12
SGMS1-208ENST00000608287 NXPH2O95156 264 aa15.78■□□□□ 0.12
SGMS1-208ENST00000608287 SFTPBP07988 381 aa15.78■□□□□ 0.12
SGMS1-208ENST00000608287 ACAA1P09110 424 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms