RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 S100A11P31949 105 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 MRPL21Q7Z2W9 205 aaKnown RBP13.75□□□□□ -0.21
CTSA-214ENST00000606788 P4HA3Q7Z4N8 544 aa13.75□□□□□ -0.21
CTSA-214ENST00000606788 ZNF2Q9BSG1 426 aaPredicted RBP13.75□□□□□ -0.21
CTSA-214ENST00000606788 I3L521 148 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 IFNA7P01567 189 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 SP6Q3SY56 376 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 RIPPLY2Q5TAB7 128 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 MYPOPQ86VE0 399 aaPredicted RBP13.74□□□□□ -0.21
CTSA-214ENST00000606788 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 CXorf58Q96LI9 332 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 PHB2Q99623 299 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 CMSS1Q9BQ75 279 aaKnown RBP13.74□□□□□ -0.21
CTSA-214ENST00000606788 ZNF442Q9H7R0 627 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 SLC7A11Q9UPY5 501 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 MAB21L2Q9Y586 359 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 ZNF250P15622 560 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 Q96M66 194 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 WDR13Q9H1Z4 485 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 COMMD9Q9P000 198 aa13.74□□□□□ -0.21
CTSA-214ENST00000606788 SLC22A20A6NK97 555 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 UBBP0CG47 229 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 CNN3Q15417 329 aaKnown RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 COMMD7Q86VX2 200 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 C17orf78Q8N4C9 275 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 OR10AD1Q8NGE0 317 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 MARS2Q96GW9 593 aaKnown RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 LIME1Q9H400 295 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 HEATR1Q9H583 2144 aaKnown RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 RAB14P61106 215 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 ERVS71-1P61550 626 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 OR2T2Q6IF00 324 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 CLEC18BQ6UXF7 455 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 UNQ6126/PRO20091Q6UXV3 157 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 ZSCAN4Q8NAM6 433 aaPredicted RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 UBALD1Q8TB05 177 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 TRIB1Q96RU8 372 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 FGF23Q9GZV9 251 aaPredicted RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 METTL8Q9H825 291 aaKnown RBP13.73□□□□□ -0.21
CTSA-214ENST00000606788 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
CTSA-214ENST00000606788 NOVA1P51513 510 aaKnown RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 PRDX4Q13162 271 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 ANKRD55Q3KP44 614 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 AADACL3Q5VUY0 350 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 FAM89BQ8N5H3 189 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 EMG1Q92979 244 aaKnown RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 DMRTA2Q96SC8 542 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 TRAF4Q9BUZ4 470 aaPredicted RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 RELNP78509 3460 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 MEX3AA1L020 520 aaKnown RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 RP2O75695 350 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 SCGNO76038 276 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 RLN2P04090 185 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 BCL3P20749 454 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 PDZK1IP1Q13113 114 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 PHLDA2Q53GA4 152 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 RPUSD3Q6P087 351 aaKnown RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 FAM109AQ8N4B1 249 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 FBLN5Q9UBX5 448 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 RPS10-NUDT3A0A1W2PQS6 291 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 SIGLEC5O15389 551 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 OSR2Q8N2R0 312 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 WDYHV1Q96HA8 205 aa13.72□□□□□ -0.21
CTSA-214ENST00000606788 ALX4Q9H161 411 aaPredicted RBP13.72□□□□□ -0.21
CTSA-214ENST00000606788 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 ZNF816-ZNF321PA0A0X1KG74 233 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 ZNF732B4DXR9 585 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 IL18BPO95998 194 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 SLC22A25Q6T423 547 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 GSG1LQ6UXU4 331 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 RFPL4BQ6ZWI9 263 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 MDP1Q86V88 176 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 ZFP62Q8NB50 900 aaPredicted RBP13.71□□□□□ -0.21
CTSA-214ENST00000606788 OR5AP2Q8NGF4 316 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 SPSB1Q96BD6 273 aa13.71□□□□□ -0.21
CTSA-214ENST00000606788 RTBDNQ9BSG5 229 aaPredicted RBP13.71□□□□□ -0.21
CTSA-214ENST00000606788 CHMP1AQ9HD42 196 aaPredicted RBP13.71□□□□□ -0.21
CTSA-214ENST00000606788 MRPS18CQ9Y3D5 142 aaKnown RBP13.71□□□□□ -0.21
CTSA-214ENST00000606788 SYNGR1O43759 233 aa13.71□□□□□ -0.22
CTSA-214ENST00000606788 TNFSF10P50591 281 aa13.71□□□□□ -0.22
CTSA-214ENST00000606788 S100A10P60903 97 aa13.71□□□□□ -0.22
CTSA-214ENST00000606788 OCSTAMPQ9BR26 566 aa13.71□□□□□ -0.22
CTSA-214ENST00000606788 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.22
CTSA-214ENST00000606788 IGKV3D-15A0A087WSY6 115 aa13.7□□□□□ -0.22
CTSA-214ENST00000606788 AGFG2O95081 481 aa13.7□□□□□ -0.22
CTSA-214ENST00000606788 PRKACBP22694 351 aa13.7□□□□□ -0.22
CTSA-214ENST00000606788 LUMP51884 338 aaPredicted RBP13.7□□□□□ -0.22
CTSA-214ENST00000606788 SUPT4H1P63272 117 aaKnown RBP13.7□□□□□ -0.22
CTSA-214ENST00000606788 PLP2Q04941 152 aa13.7□□□□□ -0.22
CTSA-214ENST00000606788 HAGHLQ6PII5 290 aaPredicted RBP13.7□□□□□ -0.22
CTSA-214ENST00000606788 TMEM200AQ86VY9 491 aa13.7□□□□□ -0.22
CTSA-214ENST00000606788 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms