RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 RAC3P60763 192 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 RPS18P62269 152 aaKnown RBP11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 PDCD1Q15116 288 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 PPA1Q15181 289 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 RAB35Q15286 201 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 PLXDC2Q6UX71 529 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 SVBPQ8N300 66 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 OR1F12Q8NHA8 337 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 OR14L1PQ8NHC6 308 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 FGFBP3Q8TAT2 258 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 ADAMTS17Q8TE56 1095 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 MMP26Q9NRE1 261 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 PADI1Q9ULC6 663 aa11.29□□□□□ -0.6
SRGAP2-209ENST00000604247 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 ZNF850A8MQ14 1090 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 RRP8O43159 456 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 PIGYQ3MUY2 71 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CCDC157Q569K6 752 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CXCL13O43927 109 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 FBXO24O75426 580 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 NME2P22392 152 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 PIGPP57054 158 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 PSG4Q00888 419 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 RTL6Q6ICC9 239 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 H3F3CQ6NXT2 135 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CLEC9AQ6UXN8 241 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 GGNQ86UU5 652 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 CBLN2Q8IUK8 224 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 FNDC9Q8TBE3 224 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 SPSB1Q96BD6 273 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 MARS2Q96GW9 593 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 SMIM3Q9BZL3 60 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 UQCC1Q9NVA1 299 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
SRGAP2-209ENST00000604247 TECTAO75443 2155 aa11.27□□□□□ -0.6
SRGAP2-209ENST00000604247 ZNF716A6NP11 495 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 FOLR3P41439 243 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 LPAR6P43657 344 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 RGS19P49795 217 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 RBP2P50120 134 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 Q0VFX4 171 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 TSPO2Q5TGU0 170 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 AAED1Q7RTV5 226 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 BORCS8Q96FH0 119 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 CPNE2Q96FN4 548 aaPredicted RBP11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 GJE1A6NN92 205 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 K7EPK0 472 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 SCGB1D2O95969 90 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 F10P00742 488 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 NRASP01111 189 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 FCGR3AP08637 254 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 CST2P09228 141 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 HTR5AP47898 357 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 ID4P47928 161 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 FXYD4P59646 89 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 WIPI1Q5MNZ9 446 aaPredicted RBP11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 FAM71E2Q8N5Q1 922 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 RHOFQ9HBH0 211 aa11.27□□□□□ -0.61
SRGAP2-209ENST00000604247 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 AGPAT2O15120 278 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 MED6O75586 246 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 DEDDO75618 318 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 TRAPPC6AO75865 159 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 MUC1P15941 1255 aaPredicted RBP11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 CHATP28329 748 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 SRD5A2P31213 254 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 FCGR2CP31995 323 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 CLDN15P56746 228 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 ZNF92Q03936 586 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 CEACAM16Q2WEN9 425 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 DHRS11Q6UWP2 260 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 FBXL14Q8N1E6 418 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 BATF2Q8N1L9 274 aa11.26□□□□□ -0.61
SRGAP2-209ENST00000604247 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms