RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 DYNLT3P51808 116 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 ERVK11-1P61568 191 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 MS4A2Q01362 244 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 COL10A1Q03692 680 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 ARSJQ5FYB0 599 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-210ENST00000604181 TMEM42Q69YG0 159 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 CCDC121Q6ZUS5 278 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 ANGPTL5Q86XS5 388 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 CALHM1Q8IU99 346 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 OR13D1Q8NGV5 346 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 MAGIXQ9H6Y5 334 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC12-210ENST00000604181 INPP5EQ9NRR6 644 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 LAMP5Q9UJQ1 280 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 PITPNC1Q9UKF7 332 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 KIAA2026Q5HYC2 2103 aa13.48□□□□□ -0.25
CCDC12-210ENST00000604181 CCDC182A6NF36 153 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 F2RL2O00254 374 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 TTRP02766 147 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 MRPL3P09001 348 aaKnown RBP13.47□□□□□ -0.25
CCDC12-210ENST00000604181 ATP6V1B1P15313 513 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 CD24P25063 80 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 MPZP25189 248 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-210ENST00000604181 DYNC1I2Q13409 638 aaKnown RBP13.47□□□□□ -0.25
CCDC12-210ENST00000604181 DEFB121Q5J5C9 76 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 HS3ST5Q8IZT8 346 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 NUFIP1Q9UHK0 495 aaKnown RBP13.47□□□□□ -0.25
CCDC12-210ENST00000604181 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
CCDC12-210ENST00000604181 ACOD1A6NK06 481 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 SH2D7A6NKC9 451 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-210ENST00000604181 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.25
CCDC12-210ENST00000604181 GSC2O15499 205 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 SRSF10O75494 262 aaKnown RBP13.46□□□□□ -0.25
CCDC12-210ENST00000604181 DHRS3O75911 302 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 PF4V1P10720 104 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 EDDM3BP56851 147 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 RPS7P62081 194 aaKnown RBP13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ACTA2P62736 377 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ACTG2P63267 376 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ACTC1P68032 377 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ACTA1P68133 377 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 CDK5Q00535 292 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 SLC34A1Q06495 639 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 APOFQ13790 326 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 C16orf89Q6UX73 402 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 BAIAP2L2Q6UXY1 529 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ZNF573Q86YE8 665 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 TPRX1Q8N7U7 411 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 ASCC1Q8N9N2 400 aaKnown RBP13.46□□□□□ -0.25
CCDC12-210ENST00000604181 MYDGFQ969H8 173 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 SLC22A13Q9Y226 551 aa13.46□□□□□ -0.25
CCDC12-210ENST00000604181 DYNC2H1Q8NCM8 4307 aaKnown RBP13.46□□□□□ -0.26
CCDC12-210ENST00000604181 DNAH7Q8WXX0 4024 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 A0A1B0GTI1 187 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 TMEM82A0PJX8 343 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 MMP23AO75900 390 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 RBP4P02753 201 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 ROM1Q03395 351 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 SPATS1Q496A3 300 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 SLC35D3Q5M8T2 416 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 CLVS2Q5SYC1 327 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 DEGS2Q6QHC5 323 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 YIPF3Q9GZM5 350 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 IL36RNQ9UBH0 155 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 POLDIP2Q9Y2S7 368 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 V9GYS6 101 aa13.45□□□□□ -0.26
CCDC12-210ENST00000604181 IGKV1-27A0A075B6S5 117 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 IGHV2-26A0A0B4J1V2 119 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 TCRBV4S1A1TA0A5B7 111 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 PF4P02776 101 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 OR12D2P58182 307 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 SLC35A2P78381 396 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 ZNF679Q8IYX0 411 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 OR14K1Q8NGZ2 314 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 TRMT10AQ8TBZ6 339 aaKnown RBP13.44□□□□□ -0.26
CCDC12-210ENST00000604181 ZNF714Q96N38 554 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 MROQ9BYG7 248 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 MTCH1Q9NZJ7 389 aa13.44□□□□□ -0.26
CCDC12-210ENST00000604181 HUWE1Q7Z6Z7 4374 aaKnown RBP13.43□□□□□ -0.26
CCDC12-210ENST00000604181 STAB2Q8WWQ8 2551 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 ARRDC5A6NEK1 342 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 DLGAP1O14490 977 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 INMTO95050 263 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 IGHA1P01876 353 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 AMY1AP04745 511 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 AMY2AP04746 511 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 LPLP06858 475 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 PRKACGP22612 351 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 ESRRGP62508 458 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 EGFEM1PQ0D2K5 195 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 EDDM3AQ14507 147 aa13.43□□□□□ -0.26
CCDC12-210ENST00000604181 FAM98BQ52LJ0 330 aaKnown RBP13.43□□□□□ -0.26
CCDC12-210ENST00000604181 MINOS1Q5TGZ0 78 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms