RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CLDN34H7C241 214 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 M0R1W7 72 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 SYNGR1O43759 233 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 IGHV1-69P01742 117 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 MMP9P14780 707 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 ATF1P18846 271 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 PRTN3P24158 256 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 PEX2P28328 305 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 PRDX2P32119 198 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 ARF6P62330 175 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 UBA52P62987 128 aaKnown RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 UBE2V2Q15819 145 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 DGUOKQ16854 277 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 CCDC58Q4VC31 144 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 DMRTC1Q5HYR2 192 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 NCR3LG1Q68D85 454 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 METAP1DQ6UB28 335 aaPredicted RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 C12orf54Q6X4T0 127 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 ANGPTL5Q86XS5 388 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 RDH10Q8IZV5 341 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 C8orf59Q8N0T1 100 aaPredicted RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 OR5D14Q8NGL3 314 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 FGGYQ96C11 551 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 CEP19Q96LK0 163 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 FAM234AQ9H0X4 552 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 HES4Q9HCC6 221 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 FGF20Q9NP95 211 aaPredicted RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 AASSQ9UDR5 926 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 GLS2Q9UI32 602 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 ZNF222Q9UK12 451 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 MYRFQ9Y2G1 1151 aa9.54□□□□□ -0.88
CCDC12-209ENST00000604164 EXOSC1Q9Y3B2 195 aaKnown RBP9.54□□□□□ -0.88
CCDC12-209ENST00000604164 IGHV3OR16-10A0A075B7F0 116 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 TRBV2A0A0J9YWF9 115 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 A0A1B0GW55 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 OR4C45A6NMZ5 311 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 H3BSH0 61 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 CASQ2O14958 399 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 WBP4O75554 376 aaKnown RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 ALX3O95076 343 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 MT-ND2P03891 347 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 SFTPBP07988 381 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 CHRM2P08172 466 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 AMY2BP19961 511 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 CAPGP40121 348 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 MTCP1P56278 107 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 NANOS3P60323 173 aaKnown RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 ERVK11-1P61568 191 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 OGFRL1Q5TC84 451 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4L9Q6RFH8 374 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 SLC25A26Q70HW3 274 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 VMO1Q7Z5L0 202 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 CALHM1Q8IU99 346 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 SERPINA12Q8IW75 414 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 ZDHHC22Q8N966 263 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 OR5D13Q8NGL4 314 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 APH1BQ8WW43 257 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 LHX4Q969G2 390 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 ADAT3Q96EY9 351 aaPredicted RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 TBX15Q96SF7 602 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 METTL8Q9H825 291 aaKnown RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 RHOFQ9HBH0 211 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DIMT1Q9UNQ2 313 aaKnown RBP9.53□□□□□ -0.88
CCDC12-209ENST00000604164 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 MXRA5Q9NR99 2828 aa9.53□□□□□ -0.88
CCDC12-209ENST00000604164 CENPVL3A0A0U1RRI6 287 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 EFCAB10A6NFE3 127 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 DNAJC9-AS1A6NH13 148 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 MAGEB3O15480 346 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 FCN3O75636 299 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 CD2P06729 351 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 AZGP1P25311 298 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 RPL31P62899 125 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 ELF3P78545 371 aaPredicted RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 ADARB1P78563 741 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 RPL22L1Q6P5R6 122 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 BRD3OSQ6XYD6 125 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 TMEM86BQ8N661 226 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 CNIH3Q8TBE1 160 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 TMEM80Q96HE8 168 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 ZNF488Q96MN9 340 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 OPALINQ96PE5 141 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 PRDM13Q9H4Q3 707 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 ZCCHC4Q9H5U6 513 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms