RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 NDUFB11Q9NX14 153 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 FIS1Q9Y3D6 152 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 DOCK5Q9H7D0 1870 aa4.37□□□□□ -1.71
SPTBN1-206ENST00000602898 ZCWPW2A0A1B0GU75 182 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 SMIM9A6NGZ8 99 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 FTCDNL1E5RQL4 147 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 CLDN5O00501 218 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 STC2O76061 302 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 TSPAN15O95858 294 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 OR10J4P0C629 311 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 SFTA3P0C7M3 94 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF43P17038 809 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 RPL4P36578 427 aaKnown RBP4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 SOX3P41225 446 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PAFAH1B2P68402 229 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 FAM174BQ3ZCQ3 159 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PWWP2BQ6NUJ5 590 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 STEAP1BQ6NZ63 245 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 Q71RC1 249 aaPredicted RBP4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 COX15Q7KZN9 410 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 D2HGDHQ8N465 521 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 FAM24BQ8N5W8 94 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC35G3Q8N808 338 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 OR5AK3PQ8NH89 298 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 REEP6Q96HR9 211 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 CCDC115Q96NT0 180 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ARHGDIGQ99819 225 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PECRQ9BY49 303 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 CHIAQ9BZP6 476 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM39BQ9GZU3 492 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM100Q9NV29 134 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 MARCH5Q9NX47 278 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 KLRF1Q9NZS2 232 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 SLAMF8Q9P0V8 285 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 STEAP1Q9UHE8 339 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 RAB22AQ9UL26 194 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 NUP98P52948 1817 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 LRRC3CA6NJW4 275 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 YJEFN3A6XGL0 299 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 HIDE1A8MVS5 230 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 CLDN34H7C241 214 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 FABP3P05413 133 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 HLA-DOAP06340 250 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 GPX3P22352 226 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ZBTB25P24278 435 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 AGTR1P30556 359 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 HTR1FP30939 366 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 KIR2DL2P43627 348 aaPredicted RBP4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 NOVP48745 357 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 TPI1P60174 286 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2G6Q5TZ20 316 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PRR27Q6MZM9 219 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF705AQ6ZN79 300 aaPredicted RBP4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PQLC2Q6ZP29 291 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 AMIGO3Q86WK7 504 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 KLHDC1Q8N7A1 406 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 C8orf44Q96CB5 159 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 MYEOVQ96EZ4 313 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ITCHQ96J02 903 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PRRG4Q9BZD6 226 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 CLN6Q9NWW5 311 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 LSM7Q9UK45 103 aaKnown RBP4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 AMDHD2Q9Y303 409 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 UBIAD1Q9Y5Z9 338 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF236Q9UL36 1845 aa4.36□□□□□ -1.71
SPTBN1-206ENST00000602898 PPIAL4CA0A0B4J2A2 164 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 LOC285095A0A1B0GVY8 99 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 KANTRA0A1W2PQU2 76 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF705GA8MUZ8 300 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SNRPGP15A8MWD9 76 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TRAPPC2LH3BP13 241 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CORTO00230 105 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 BCL2L11O43521 198 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM50AO95807 157 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 HLA-HP01893 362 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ORM1P02763 201 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 HPXP02790 462 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PAX9P55771 341 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF121P58317 390 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ERVPABLB-1P60509 514 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ID2Q02363 134 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 GPR18Q14330 331 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1Q1Q15612 314 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MSMPQ1L6U9 139 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 HLA-BQ31612 363 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 EIPR1Q53HC9 387 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 AWAT1Q58HT5 328 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1J1Q8NGS3 322 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR14K1Q8NGZ2 314 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 JOSD2Q8TAC2 188 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms