RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ESPNLQ6ZVH7 1005 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 OLIG3Q7RTU3 272 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM192Q8IY95 271 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 OR6T1Q8NGN1 323 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 OR10S1Q8NGN2 331 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 HPDLQ96IR7 371 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 QTRT1Q9BXR0 403 aaKnown RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 POLR2J3Q9H1A7 115 aaKnown RBP7.81□□□□□ -1.16
COMMD3-215ENST00000602574 BANF2Q9H503 90 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 TVP23BQ9NYZ1 205 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 KIAA1456Q9P272 454 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 PIKFYVEQ9Y2I7 2098 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 MYLKQ15746 1914 aa7.81□□□□□ -1.16
COMMD3-215ENST00000602574 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 CD5LO43866 347 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 GNG4P50150 75 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 SMIM11AP58511 58 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 DMWDQ09019 674 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ACKR1Q16570 336 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 UPP1Q16831 310 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ACSM3Q53FZ2 586 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF506Q5JVG8 444 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 AMMECR1LQ6DCA0 310 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 RPL7L1Q6DKI1 246 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 FOXI2Q6ZQN5 318 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 Q6ZVH6 145 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 SLC25A42Q86VD7 318 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF440Q8IYI8 595 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 SMIM20Q8N5G0 67 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF709Q8N972 641 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 NFKBIDQ8NI38 313 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 C1orf216Q8TAB5 229 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 PTPMT1Q8WUK0 201 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 FBXL17Q9UF56 701 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 GAGE12HA6NDE8 117 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 RBFOX3A6NFN3 312 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 J3QR89 54 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 J3QRE1 110 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 GPR182O15218 404 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 TRAPPC6AO75865 159 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ITGBL1O95965 494 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 PSG2P11465 335 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ATP6V0CP27449 155 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ADORA2BP29275 332 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 TSFMP43897 325 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ID4P47928 161 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 RPL38P63173 70 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 FAM78BQ5VT40 261 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 Q6ZWC4 215 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 CENPVQ7Z7K6 275 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF615Q8N8J6 731 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ZDHHC22Q8N966 263 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 OR5AU1Q8NGC0 362 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 ESAMQ96AP7 390 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 PGLYRP2Q96PD5 576 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 DERL1Q9BUN8 251 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 MAGEH1Q9H213 219 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 Q9N2K0 584 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 PRSS50Q9UI38 385 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 BOKQ9UMX3 212 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 DAPP1Q9UN19 280 aa7.8□□□□□ -1.16
COMMD3-215ENST00000602574 MRPS28Q9Y2Q9 187 aaKnown RBP7.8□□□□□ -1.16
COMMD3-215ENST00000602574 THSD7AQ9UPZ6 1657 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 TTC3P53804 2025 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 CDC14CA4D256 554 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 M0QXV9 152 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 SERPINA7P05543 415 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 CEACAM5P06731 702 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 PSG9Q00887 426 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 EXOSC7Q15024 291 aaKnown RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 SPSB3Q6PJ21 355 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 BCDIN3DQ7Z5W3 292 aaKnown RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 AMIGO3Q86WK7 504 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM229BQ8NBD8 167 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 OR5A1Q8NGJ0 315 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 SLC25A40Q8TBP6 338 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 SEC22AQ96IW7 307 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 NPY6RQ99463 290 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 NMNAT2Q9BZQ4 307 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 THAP10Q9P2Z0 257 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 VPREB3Q9UKI3 123 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 TSSC4Q9Y5U2 329 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 COL4A4P53420 1690 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 MYO10Q9HD67 2058 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-215ENST00000602574 MCM3APO60318 1980 aa7.79□□□□□ -1.16
COMMD3-215ENST00000602574 ODAMA1E959 279 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 OR51F1A6NGY5 319 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ZBTB42B2RXF5 422 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 H0YL77 283 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 EDN1P05305 212 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 DBHP09172 617 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CR2P20023 1033 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 SERPINA4P29622 427 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 PRDX3P30048 256 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms