RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 GYPAP02724 150 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 UCHL1P09936 223 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 GP2P55259 537 aaKnown RBP16.15■□□□□ 0.18
UPF1-209ENST00000600310 FABP5Q01469 135 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 NEDD8Q15843 81 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 FAM27D1Q5T7N8 215 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 DDI2Q5TDH0 399 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 LYPD2Q6UXB3 125 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 ACP7Q6ZNF0 438 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 SAXO1Q8IYX7 474 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 LINC01356Q8N9X3 169 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 ZSCAN4Q8NAM6 433 aaPredicted RBP16.15■□□□□ 0.18
UPF1-209ENST00000600310 SLAMF9Q96A28 289 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 MSI2Q96DH6 328 aaKnown RBP16.15■□□□□ 0.18
UPF1-209ENST00000600310 NEIL1Q96FI4 390 aaPredicted RBP16.15■□□□□ 0.18
UPF1-209ENST00000600310 CEP19Q96LK0 163 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 NLKQ9UBE8 527 aa16.15■□□□□ 0.18
UPF1-209ENST00000600310 MAGEA13PA6NCF6 341 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 TRIM64CA6NLI5 447 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 B4DSR2 109 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 GABRPO00591 440 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 SPRY1O43609 319 aaPredicted RBP16.14■□□□□ 0.17
UPF1-209ENST00000600310 NXPH2O95156 264 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 RPS2P15880 293 aaKnown RBP16.14■□□□□ 0.17
UPF1-209ENST00000600310 AMY2BP19961 511 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 SMIM21Q3B7S5 101 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 HSD17B12Q53GQ0 312 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 ATPAF1Q5TC12 328 aaPredicted RBP16.14■□□□□ 0.17
UPF1-209ENST00000600310 STUMQ69YW2 141 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 NLRC3Q7RTR2 1065 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 SATL1Q86VE3 508 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 OR8B3Q8NGG8 313 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 OR5D18Q8NGL1 313 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 OR51F2Q8NH61 342 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 MUL1Q969V5 352 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 OR8B2Q96RD0 313 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 PPIL3Q9H2H8 161 aaKnown RBP16.14■□□□□ 0.17
UPF1-209ENST00000600310 SNTG1Q9NSN8 517 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 KAAG1Q9UBP8 84 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 NF1P21359 2839 aa16.14■□□□□ 0.17
UPF1-209ENST00000600310 IGKV1-12A0A0C4DH73 117 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 MEGF11A6BM72 1044 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 OR2AT4A6NND4 320 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 ADAM20O43506 726 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 ANGPTL7O43827 346 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 CD5LO43866 347 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 IGKV1D-12P01611 117 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 GALP22466 123 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 ZNF93P35789 620 aaPredicted RBP16.13■□□□□ 0.17
UPF1-209ENST00000600310 CD200R1LQ6Q8B3 271 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 CLEC9AQ6UXN8 241 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 CDH26Q8IXH8 852 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 Q8IYB0 196 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 PXT1Q8NFP0 134 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 OR5T2Q8NGG2 359 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 ANGPTL6Q8NI99 470 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 GPER1Q99527 375 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 DNTTIP1Q9H147 329 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 GSX1Q9H4S2 264 aaPredicted RBP16.13■□□□□ 0.17
UPF1-209ENST00000600310 TCF7L1Q9HCS4 588 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 VCX3AQ9NNX9 186 aa16.13■□□□□ 0.17
UPF1-209ENST00000600310 ACANP16112 2415 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 TRDV1A0A1B0GX56 115 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 F8VVB4 439 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 F8VWA3 439 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 TRAPPC2LH3BP13 241 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 FOXH1O75593 365 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 ARL6IP5O75915 188 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 KDM4BO94953 1096 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 MAS1P04201 325 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 TMEM225BP0DP42 221 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 PSG2P11465 335 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 SRMP19623 302 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 NPBWR2P48146 333 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 SEC61A1P61619 476 aaKnown RBP16.12■□□□□ 0.17
UPF1-209ENST00000600310 ESCO2Q56NI9 601 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 BATF2Q8N1L9 274 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 NKAIN3Q8N8D7 197 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 CCL13Q99616 98 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 RHOFQ9HBH0 211 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 CTSZQ9UBR2 303 aa16.12■□□□□ 0.17
UPF1-209ENST00000600310 YLPM1P49750 1951 aaKnown RBP16.11■□□□□ 0.17
UPF1-209ENST00000600310 IGKV1D-17A0A075B6S4 117 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 A8MXK9 166 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 TMPRSS2O15393 492 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 KNG1P01042 644 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 TGFAP01135 160 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 MSMBP08118 114 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 JUNBP17275 347 aaPredicted RBP16.11■□□□□ 0.17
UPF1-209ENST00000600310 BCL3P20749 454 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 PTGFRP43088 359 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 PITPNBP48739 271 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 ASCL4Q6XD76 172 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 ZNF841Q6ZN19 808 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 ZNF788Q6ZQV5 615 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 SLC36A1Q7Z2H8 476 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 C1QL2Q7Z5L3 287 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 LRRTM1Q86UE6 522 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 LYPD6Q86Y78 171 aa16.11■□□□□ 0.17
UPF1-209ENST00000600310 TNFAIP8L1Q8WVP5 186 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms