RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PAICSP22234 425 aaKnown RBP4.86□□□□□ -1.63
VRK3-220ENST00000600259 CD24P25063 80 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 AZGP1P25311 298 aaKnown RBP4.86□□□□□ -1.63
VRK3-220ENST00000600259 HAAOP46952 286 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 SLC35A2P78381 396 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 ROM1Q03395 351 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 MEF2CQ06413 473 aaPredicted RBP4.86□□□□□ -1.63
VRK3-220ENST00000600259 CD69Q07108 199 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 RIPPLY1Q0D2K3 151 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 SMIM21Q3B7S5 101 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 NKAPLQ5M9Q1 402 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 BAIAP2L2Q6UXY1 529 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 ANGPTL5Q86XS5 388 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 CPOQ8IVL8 374 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 MRPL41Q8IXM3 137 aaKnown RBP4.86□□□□□ -1.63
VRK3-220ENST00000600259 PGAM4Q8N0Y7 254 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 OR51E1Q8TCB6 317 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 FEVQ99581 238 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 PBOV1Q9GZY1 135 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 C1orf21Q9H246 121 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 GPR84Q9NQS5 396 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 ABCB10Q9NRK6 738 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 DNAJB9Q9UBS3 223 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 LSM4Q9Y4Z0 139 aaKnown RBP4.86□□□□□ -1.63
VRK3-220ENST00000600259 HILPDAQ9Y5L2 63 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 RYR2Q92736 4967 aa4.86□□□□□ -1.63
VRK3-220ENST00000600259 HUWE1Q7Z6Z7 4374 aaKnown RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 IGKV1-27A0A075B6S5 117 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 IGHV2-26A0A0B4J1V2 119 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 TMEM269A0A1B0GVZ9 245 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 CCDC182A6NF36 153 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 SH2D7A6NKC9 451 aaPredicted RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 LY6LH3BQJ8 138 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 PSMD9O00233 223 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 F2RL2O00254 374 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 DLGAP1O14490 977 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 NXPH2O95156 264 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 IGLV1-47P01700 117 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 PF4P02776 101 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ALDOBP05062 364 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 LPLP06858 475 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 CHRM2P08172 466 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 NHLRC4P0CG21 123 aaPredicted RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 PF4V1P10720 104 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ATP6V1B2P21281 511 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 THBS3P49746 956 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR12D2P58182 307 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ACTA2P62736 377 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ACTG2P63267 376 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ACTC1P68032 377 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ACTA1P68133 377 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 CDK5Q00535 292 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 SLC34A1Q06495 639 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 MFGE8Q08431 387 aaPredicted RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 IL24Q13007 206 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 GINS1Q14691 196 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 UTF1Q5T230 341 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 LCN1P1Q5VSP4 162 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 PLCXD3Q63HM9 321 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR2T5Q6IEZ7 315 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 PLBD1Q6P4A8 553 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 C18orf65Q6ZTR6 163 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 C16orf82Q7Z2V1 217 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 KRT77Q7Z794 578 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 TMEM179BQ7Z7N9 219 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ZNF573Q86YE8 665 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 EGFL6Q8IUX8 553 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR8H2Q8N162 312 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 BATF2Q8N1L9 274 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 BBS1Q8NFJ9 593 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR52N4Q8NGI2 321 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR4P4Q8NGL7 312 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR14K1Q8NGZ2 314 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR2T29Q8NH02 315 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 FAM81AQ8TBF8 368 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 SNX22Q96L94 193 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 P2RX4Q99571 388 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 PKIBQ9C010 78 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 YIPF3Q9GZM5 350 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 LIN7BQ9HAP6 207 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 GPR173Q9NS66 373 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ARL8BQ9NVJ2 186 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ZNF446Q9NWS9 450 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 MTCH1Q9NZJ7 389 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 ACTR3BQ9P1U1 418 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 DPM3Q9P2X0 92 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 OR14J1Q9UGF5 321 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 NUFIP1Q9UHK0 495 aaKnown RBP4.85□□□□□ -1.63
VRK3-220ENST00000600259 ENPP5Q9UJA9 477 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 COPS3Q9UNS2 423 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 PIGLQ9Y2B2 252 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 SESN1Q9Y6P5 492 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 U3KQV3 271 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 V9GYS6 101 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 DNAH1Q9P2D7 4330 aa4.85□□□□□ -1.63
VRK3-220ENST00000600259 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms