RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 FTMTQ8N4E7 242 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 SYNPRQ8TBG9 265 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 ACOT12Q8WYK0 555 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 GTF3AQ92664 365 aaKnown RBP10.7□□□□□ -0.7
UPF1-208ENST00000600012 ITFG2Q969R8 447 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 SLC25A28Q96A46 364 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 FOXRED1Q96CU9 486 aaPredicted RBP10.7□□□□□ -0.7
UPF1-208ENST00000600012 BORCS8Q96FH0 119 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 C1orf159Q96HA4 380 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 TECTBQ96PL2 329 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 ADAT1Q9BUB4 502 aaKnown RBP10.7□□□□□ -0.7
UPF1-208ENST00000600012 MRPL37Q9BZE1 423 aaKnown RBP10.7□□□□□ -0.7
UPF1-208ENST00000600012 ABRACLQ9P1F3 81 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
UPF1-208ENST00000600012 OR5V1Q9UGF6 321 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 DUSP13Q9UII6 198 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 SLC7A11Q9UPY5 501 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 PEX16Q9Y5Y5 336 aa10.7□□□□□ -0.7
UPF1-208ENST00000600012 M0R233 179 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 PLATP00750 562 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 EIF4EP06730 217 aaKnown RBP10.69□□□□□ -0.7
UPF1-208ENST00000600012 ZNF250P15622 560 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 CFPP27918 469 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 S100A5P33763 92 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 POU3F4P49335 361 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 EVX1P49640 407 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 FUT6P51993 359 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 MTCP1P56278 107 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 KLF3P57682 345 aaPredicted RBP10.69□□□□□ -0.7
UPF1-208ENST00000600012 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 MADCAM1Q13477 382 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 KISS1Q15726 138 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 AWAT2Q6E213 333 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 SAMD12Q8N8I0 201 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 OR8G5Q8NG78 346 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 OR51D1Q8NGF3 324 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 CEP19Q96LK0 163 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 UQCC2Q9BRT2 126 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 NEK6Q9HC98 313 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 MRPL15Q9P015 296 aaKnown RBP10.69□□□□□ -0.7
UPF1-208ENST00000600012 MRPS28Q9Y2Q9 187 aaKnown RBP10.69□□□□□ -0.7
UPF1-208ENST00000600012 MPC1Q9Y5U8 109 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 DYSFO75923 2080 aa10.69□□□□□ -0.7
UPF1-208ENST00000600012 A0A0A6YYJ9 748 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 PQLC2LA1A4F0 135 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 B4DSR2 109 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 ZNF732B4DXR9 585 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 H0YL77 283 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 MLNRO43193 412 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 CALCBP10092 127 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 RBP2P50120 134 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 GPM6AP51674 278 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 ATP1B3P54709 279 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 DYNC1I2Q13409 638 aaKnown RBP10.68□□□□□ -0.7
UPF1-208ENST00000600012 OR8G1Q15617 311 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 CEACAM21Q3KPI0 293 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 OR10K2Q6IF99 312 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 Q6ZR03 302 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 PNLDC1Q8NA58 520 aaKnown RBP10.68□□□□□ -0.7
UPF1-208ENST00000600012 OR10AD1Q8NGE0 317 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 OR8S1Q8NH09 359 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 TNFAIP8L1Q8WVP5 186 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 OR5P3Q8WZ94 311 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 MRPL24Q96A35 216 aaKnown RBP10.68□□□□□ -0.7
UPF1-208ENST00000600012 FAM3DQ96BQ1 224 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 RNF170Q96K19 258 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 HIST1H2AAQ96QV6 131 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 MS4A5Q9H3V2 200 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 MSL2Q9HCI7 577 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 AKIP1Q9NQ31 210 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 TAAR3PQ9P1P4 343 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 SPATA2Q9UM82 520 aa10.68□□□□□ -0.7
UPF1-208ENST00000600012 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 TMEM272A0A1B0GTI8 110 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 LYNX1G3V0Z9 82 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 SPRY1O43609 319 aaPredicted RBP10.67□□□□□ -0.7
UPF1-208ENST00000600012 TMEM127O75204 238 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 IGHV3-13P01766 116 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 LYNX1P0DP58 116 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ARSBP15848 533 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ELK1P19419 428 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 TNFSF8P32971 234 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 GPR6P46095 362 aaPredicted RBP10.67□□□□□ -0.7
UPF1-208ENST00000600012 EFNB2P52799 333 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ZP1P60852 638 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 SCGB2A2Q13296 93 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 MOGQ16653 247 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 C2orf76Q3KRA6 126 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 UBE2NLQ5JXB2 153 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 GLIPR1L1Q6UWM5 242 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 C12orf54Q6X4T0 127 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 C1QL2Q7Z5L3 287 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms