RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	RBMY1E	A6NEQ0	496 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	C5orf58	C9J3I9	102 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	ORC5	O43913	435 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PMS2P2	O95744	297 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	AIFM1	O95831	613 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594		P01737	135 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	REG1A	P05451	166 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	HTR1A	P08908	422 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	RBMY1D	P0C7P1	496 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	RBMY1A1	P0DJD3	496 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	CD79A	P11912	226 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	HSD17B1	P14061	328 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	LIF	P15018	202 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	CD1E	P15812	388 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	ATF1	P18846	271 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PFN2	P35080	140 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	DNAJB13	P59910	316 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	DYNLL1	P63167	89 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	RUNX1	Q01196	453 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	FASTK	Q14296	549 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF169	Q14929	603 aa	Predicted RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	P2RY6	Q15077	328 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	SHH	Q15465	462 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	MPPED2	Q15777	294 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	NRF1	Q16656	503 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	CEACAM16	Q2WEN9	425 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	TCTEX1D4	Q5JR98	221 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	LINC00242	Q5T6M2	205 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	TMEM78	Q5T7P6	136 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	HENMT1	Q5T8I9	393 aa	Known RBP	4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	FBXW9	Q5XUX1	488 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	OPN5	Q6U736	354 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	FAM183BP	Q6ZVS7	135 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	CHMP1B	Q7LBR1	199 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	OR9I1	Q8NGQ6	314 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594		Q8TCH9	128 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	IL22RA2	Q969J5	263 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	MEIS3	Q99687	375 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PITX2	Q99697	317 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	EBF4	Q9BQW3	602 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	TM2D1	Q9BX74	207 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	KRTAP4-5	Q9BYR2	181 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	TAS2R5	Q9NYW4	299 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PSG8	Q9UQ74	426 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	FBXO7	Q9Y3I1	522 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PPIP5K1	Q6PFW1	1433 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	PALLD	Q8WX93	1383 aa		4.27	□□□□□ -1.73
PAF1-208	ENST00000598594	XIRP1	Q702N8	1843 aa	Known RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IGLV5-45	A0A087WSX0	123 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	UQCRHL	A0A096LP55	91 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IGLV5-52	A0A0A0MRZ9	124 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MAP1LC3B2	A6NCE7	125 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	CCDC160	A6NGH7	325 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF726	A6NNF4	738 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	BTNL10	A8MVZ5	291 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	NPIPB9	F8W1W9	429 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MFSD11	O43934	449 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	UPK1B	O75841	260 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IFNA10	P01566	189 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IGHV3-9	P01782	118 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IGHV4-39	P01824	125 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ALPL	P05186	524 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	EIF4E	P06730	217 aa	Known RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	UQCRH	P07919	91 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	IL3	P08700	152 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	OR56A5	P0C7T3	313 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	GKN3P	P0CG01	181 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF708	P17019	499 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	RFX2	P48378	723 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MTPN	P58546	118 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	PRDX1	Q06830	199 aa	Known RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MLF2	Q15773	248 aa	Predicted RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ODF3L2	Q3SX64	289 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	C14orf28	Q4W4Y0	310 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF684	Q5T5D7	378 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	C9orf64	Q5T6V5	341 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	TEX36	Q5VZQ5	186 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	SUMO4	Q6EEV6	95 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	NAA40	Q86UY6	237 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MUC15	Q8N387	334 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF614	Q8N883	585 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	NEIL3	Q8TAT5	605 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZFP90	Q8TF47	636 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	TMED6	Q8WW62	240 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNRF4	Q8WWF5	429 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	RXFP2	Q8WXD0	754 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	FAM168A	Q92567	244 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	PGLYRP4	Q96LB8	373 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	LINC00477	Q96M19	166 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	KIR2DL4	Q99706	377 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	C1orf50	Q9BV19	199 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	MAP1LC3B	Q9GZQ8	125 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	CHST5	Q9GZS9	411 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	CALY	Q9NYX4	217 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	VAX2	Q9UIW0	290 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	POU2F3	Q9UKI9	436 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF257	Q9Y2Q1	563 aa		4.26	□□□□□ -1.73
PAF1-208	ENST00000598594	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms