RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ANGPTL5Q86XS5 388 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 TMEM219Q86XT9 240 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 TRMT10AQ8TBZ6 339 aaKnown RBP8.52□□□□□ -1.05
LSM4-205ENST00000597776 HES4Q9HCC6 221 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
LSM4-205ENST00000597776 DNAJB9Q9UBS3 223 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 POLDIP2Q9Y2S7 368 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 TMEM14AQ9Y6G1 99 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 V9GYS6 101 aa8.52□□□□□ -1.05
LSM4-205ENST00000597776 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 A0A1W2PR64 198 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 FAM90A8PA6NJQ4 464 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 F8VVB4 439 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 F8VWA3 439 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 DLGAP1O14490 977 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 NOS1APO75052 506 aaPredicted RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 FAM107AO95990 144 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 ARG1P05089 322 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 CD28P10747 220 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 JUNBP17275 347 aaPredicted RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 DAPP51397 102 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 CXCR4P61073 352 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 COL10A1Q03692 680 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 PTGES3Q15185 160 aaKnown RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 FAM189A2Q15884 450 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 KPRPQ5T749 579 aaPredicted RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 FAHD1Q6P587 224 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 CCBE1Q6UXH8 406 aaPredicted RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 Q6ZPA2 131 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 MEPCEQ7L2J0 689 aaKnown RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 SLC35F2Q8IXU6 374 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 ELMOD2Q8IZ81 293 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 ASCC1Q8N9N2 400 aaKnown RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 OR14K1Q8NGZ2 314 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 ITFG2Q969R8 447 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 MOB1AQ9H8S9 216 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 ADGRL4Q9HBW9 690 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 SERTAD4Q9NUC0 356 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 MRM2Q9UI43 246 aaKnown RBP8.51□□□□□ -1.05
LSM4-205ENST00000597776 SLC22A13Q9Y226 551 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 R4GMQ9 66 aa8.51□□□□□ -1.05
LSM4-205ENST00000597776 FAM230AA0A1W2PPH8 454 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 TCRBV3S1A0A5B6 114 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 C17orf98A8MV24 154 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 VGLL3A8MV65 326 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 ODF3BA8MYP8 253 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 K7N7A8 449 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 MITFO75030 526 aaPredicted RBP8.5□□□□□ -1.05
LSM4-205ENST00000597776 FBXO24O75426 580 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 INMTO95050 263 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 RPP14O95059 124 aaKnown RBP8.5□□□□□ -1.05
LSM4-205ENST00000597776 MPZP25189 248 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 EPHA2P29317 976 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 EDDM3BP56851 147 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 SSX2Q16385 188 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 AADACL4Q5VUY2 407 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 Q6ZS46 218 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 SSX6Q7RTT6 188 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 TCF23Q7RTU1 214 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 TCEANCQ8N8B7 351 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 DNAJC9Q8WXX5 260 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 OR5M11Q96RB7 305 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 TBX5Q99593 518 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 MMP28Q9H239 520 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 TCF19Q9Y242 345 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 PLXNB1O43157 2135 aa8.5□□□□□ -1.05
LSM4-205ENST00000597776 IGKV1-27A0A075B6S5 117 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 A6NDX4 124 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 ZNF670-ZNF695F2Z2N8 137 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 ZNF737O75373 536 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 APOL3O95236 402 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 ZNF728P0DKX0 622 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 HOXB6P17509 224 aaKnown RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 IL24Q13007 206 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 DYNC1I2Q13409 638 aaKnown RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 EDDM3AQ14507 147 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 CNN3Q15417 329 aaKnown RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 UBE2V2Q15819 145 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 TMEM95Q3KNT9 176 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 ZNF626Q68DY1 528 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 Q6ZSR3 168 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 Q8N2B8 174 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 RPS4Y2Q8TD47 263 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 UTP4Q969X6 686 aaKnown RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 SLAMF9Q96A28 289 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 FOXRED1Q96CU9 486 aaPredicted RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 CEP19Q96LK0 163 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 IL4I1Q96RQ9 567 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
LSM4-205ENST00000597776 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
LSM4-205ENST00000597776 CADM1Q9BY67 442 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms